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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST042521
species: Sorghum bicolor
miRNA family: MIR167
source: miRBase, original name: sbi-MIR167c (MI0001555)

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTG

miRNA*
GATCATGTTGCAGCTTCACT

mismatches: 0
bulges: 1

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pre-miRNA
CTTTGCTGGTGTGAGAGGTTGAAGCTGCCAGCATGATCTGGTGGCCGGCCGGCCGGCGTCTCTCAAGTGCGCTCGGATCGGAGACGCGTCGCCAGATCAT
GTTGCAGCTTCACT
CTCTCGCAACCACCAAA


dot-bracket secondary structure
..(((.(((((((((((..(((((((((.((((((((((((((((((.(((((((((((((....)).)))).))).))))...)).)))))))))))))
))))))))))))..
))))))).)))).))).



SIMILARITIES
miRBase zma-MIR167h: 0.00000000000003

PMRD sbi-miR167c: 2e-64

microPC miR167: 0.000002
UniProt no hits

RFAM MIR167_1: 2e-61

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Dezulian T, Palatnik JF, Huson DH, Weigel D, http://genomebiology.com/2005/6/11/p13 (2005)., "Conservation and divergence of microRNA families in plants"




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