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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008493
species: Sorghum bicolor
miRNA family: MIR444
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGTGGCTTTCTTGCAAGTTG

miRNA*
ACTTGCAAGAAAGTCACAAAA

mismatches: 1
bulges: 0

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pre-miRNA
GGTGGCACCAAGCATGAGGCAGGAACTGCATTACTTGCAAGAAAGTCACAAAATCAATTGCAGACCATACTTGTGGCTTTCTTGCAAGTTGTGCAGTTGT
TGCCTCAAGCTTGCTGCCTC


dot-bracket secondary structure
...((((.(((((.((((((((.((((((((.(((((((((((((((((((...................))))))))))))))))))).)))))))).)
))))))).))))).))))..



SIMILARITIES
miRBase ssp-MIR444b: 3e-48

PMRD tae-miR2024b: 4e-19

microPC miR444: 2e-46
UniProt no hits

RFAM MIR444: 3e-39
most similar mature miRNAs

Identical with: miR444 from microPC (MNEST045278)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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