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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000653
species: Festuca arundinacea
miRNA family: MIR160
source: miRNEST

Taxonomy by NCBI:
Festuca arundinacea Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCCA

miRNA*
GCGTGCAAGGTGCCAAGCATG

mismatches: 3
bulges: 0

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pre-miRNA
GATCTAATCAAGGTTGTGCTGTGCCTGGCTCCCTGTATGCCACACATGTAGCCCAACCCAAGAATGTGGTTGCCTGCTGTGGGTGGCGTGCAAGGTGCCA
AGCATG
CATATATGTATATGGTCT


dot-bracket secondary structure
((((..........(((((.((((.((((.((.((((((((((...((((((.(((((((....)).)))))...)))))).)))))))))).)).))))
.)))))
)))).........)))).



SIMILARITIES
miRBase bdi-MIR160c: 9e-39

PMRD sbi-miR160a: 3e-23

microPC miR160: 1e-41
UniProt no hits

RFAM mir-160: 6e-25
most similar mature miRNAs

Identical with: miR160 from microPC (MNEST045344)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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