miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Caenorhabditis elegans, Ancylostoma caninum, Ascaris suum, Heterorhabditis bacteriophora, Brachionus plicatilis, Pristionchus pacificus, Caenorhabditis japonica, Caenorhabditis brenneri, Strongyloides ratti, Brugia malayi, Trichinella spiralis, Meloidogyne hapla, Heterodera glycines, Meloidogyne incognita, Caenorhabditis remanei, Trichinella pseudospiralis, Onchocerca volvulus, Nippostrongylus brasiliensis, Meloidogyne chitwoodi, Globodera rostochiensis, Strongyloides stercoralis, Ancylostoma ceylanicum



ABOUT THIS RECORD

ID: MNEST009126
species: Heterorhabditis bacteriophora
miRNA family: miR-2476
source: miRNEST

Taxonomy by NCBI:
Heterorhabditis bacteriophora Heterorhabditis Heterorhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGTTGTGGTCTAGTGGTTAGG

miRNA*
 AGCCTCTTAACCACAACTAT

mismatches: 4
bulges: 1
View larger
pre-miRNA
 GAATTTAAGTCCAGCCTCTTAACCACAACTATTTACCGCTATTGTGGTCGCAGCTTAATTACTCACAGAAATCTCTTCCCTCTGTGTAGCCGCACCCGTA
GTCCGTTGTGGTCTAGTGGTTAGGATTTACGGC

dot-bracket secondary structure
.....(((((((((((.((..((((((((........(((((...(((.((.(((........((((((...........)))))).))).))))).)))
))..))))))))..)).)))).)))))))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM tRNA: 0.0000001		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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