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Species belonging to selected taxon:
Caenorhabditis elegans
,
Ancylostoma caninum
,
Heterorhabditis bacteriophora
,
Caenorhabditis japonica
,
Caenorhabditis brenneri
,
Strongyloides ratti
,
Caenorhabditis remanei
,
Nippostrongylus brasiliensis
,
Strongyloides stercoralis
,
Ancylostoma ceylanicum
ABOUT THIS RECORD
ID:
MNEST009126
species:
Heterorhabditis bacteriophora
miRNA family:
miR-2476
source:
miRNEST
Taxonomy by NCBI:
Heterorhabditis bacteriophora
Heterorhabditis
Heterorhabditidae
Rhabditoidea
Rhabditida
Chromadorea
Nematoda
Pseudocoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGTTGTGGTCTAGTGGTTAGG
miRNA*
AGCCTCTTAACCACAACTAT
mismatches:
4
bulges:
1
View larger
pre-miRNA
GAATTTAAGTCC
AGCCTCTTAACCACAACTAT
TTACCGCTATTGTGGTCGCAGCTTAATTACTCACAGAAATCTCTTCCCTCTGTGTAGCCGCACCCGTA
GTC
CGTTGTGGTCTAGTGGTTAGG
ATTTACGGC
dot-bracket secondary structure
.....(((((((
((((.((..((((((((...
.....(((((...(((.((.(((........((((((...........)))))).))).))))).)))
)).
.))))))))..)).)))).))
)))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
tRNA: 0.0000001
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record