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Species belonging to selected taxon:
Fragaria vesca
,
Fragaria x ananassa
,
Humulus lupulus
,
Prunus armeniaca
,
Prunus persica
ABOUT THIS RECORD
ID:
MNEST002243
species:
Prunus persica
miRNA family:
MIR2592
source:
miRNEST
Taxonomy by NCBI:
Prunus persica
Prunus
Amygdaleae
Spiraeoideae
Rosaceae
Rosales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTATGCTTGAGTCATGTTGAT
miRNA*
TAATGTGAAGTCAAGTTTGGAT
mismatches:
4
bulges:
1
View larger
pre-miRNA
AATCATGTGTGAAATCAAGGTTGGATGTGTGATGCTTATTGA
TAATGTGAAGTCAAGTTTGGAT
GAGTGCTCCTAACAAAATAAGATGTTTTTTTTTTTT
TTTTTCAATCAATAGAAGAAGGGATATTCGAACTAGGGTTAAAAAGAGAAAAAATATCATGCTCAGGGTTCATATTAATCCTTATTTTTATTTTGTTTTA
ATTAGTTGCTACTAGAATCTTACTAAAGGATAAGATTTGAAGTTATTGGTGGTGCAAGGAAATAATAAATTAGTTTTTGCGAGGAATATTTGCA
TTATGC
TTGAGTCATGTTGAT
GACGTTTGCACTGCTTAGTAAGCAGAATTGTTTGTTTGT
dot-bracket secondary structure
.((((((......(((.......))).)))))).........
((((((((..((((((.(((.(
(((((.((((((((((((((((.((...((((((((
(((((.((((..(((..(((......)))...))).)))).)))))))))))))......))..((((((......))))))...))))))))))))...
((((((.(((....((((((((((...)).))))))))..))).))))))..((((((((..(((....))).)))))))))))).))))))..
))).))
)))).))))))))..
((((...(((((((((...))))))...))).))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record