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Species belonging to selected taxon:

Ipomoea batatas, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST002669
species: Solanum melongena
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Solanum melongena Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCACTGCCTCTTCCCTGGCT

miRNA*
 ACGGGGACGAGACAGAGCATG

mismatches: 4
bulges: 0
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pre-miRNA
 AATATGGTGTGGAGTGGATAGACGGGGACGAGACAGAGCATGAGATGTGCAATTTTACTTGCCCATTCCATGCACTGCCTCTTCCCTGGCTCTCCTCTCC
CAACAATCC

dot-bracket secondary structure
....((.((.((((.(((.((.((((((.(((.(((.(((((.((((.((((......)))).)))).))))).))).))).)))))).)).))).))))
)).))....


SIMILARITIES
miRBase csi-MIR408: 0.00000002

PMRD cpt-miR408: 0.00000002

microPC miR408: 0.000001		UniProt no hits

RFAM MIR408: 0.000002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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