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Species belonging to selected taxon:
Ipomoea batatas
,
Nicotiana benthamiana
,
Nicotiana langsdorffii x Nicotiana sanderae
,
Nicotiana tabacum
,
Petunia axillaris subsp. axillaris
,
Solanum habrochaites
,
Solanum lycopersicum
,
Solanum melongena
,
Solanum pennellii
,
Solanum torvum
,
Capsicum annuum
,
Solanum tuberosum
,
Ipomoea nil
ABOUT THIS RECORD
ID:
MNEST045272
species:
Solanum tuberosum
source:
microPC, original name:
miR403
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGATTCACGCACAAACTCG
miRNA*
mismatches:
3
bulges:
0
View larger
pre-miRNA
GTTTGTGCGTGAATCTAACAACCCTTTTCATCAGAAAAACTGTTGTTGTTTGC
TAGATTCACGCACAAACTCG
dot-bracket secondary structure
((((((((((((((((((((((..(((((....)))))...))))).......
)))))))))))))))))...
SIMILARITIES
miRBase
vvi-MIR403d
:
0.000003
PMRD
stu-miR403
:
5e-36
microPC
miR403
:
0.0002
UniProt
no hits
RFAM
MIR403: 0.00006
Identical with:
stu-miR403
from PMRD (
MNEST054669
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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