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Species belonging to selected taxon:
Solanum habrochaites
,
Solanum lycopersicum
,
Solanum melongena
,
Solanum pennellii
,
Solanum torvum
,
Solanum tuberosum
ABOUT THIS RECORD
ID:
MNEST046749
species:
Solanum tuberosum
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GACAGAAGAGAGTGAGCAC
miRNA*
GCTCACTTCTCATTCTGTC
mismatches:
0
bulges:
2
View larger
pre-miRNA
GACAGAAGAGAGTGAGCAC
ACGCAGTCGAATTGTATAAACATTTATACAATTGTCATTTGCGTGT
GCTCACTTCTCATTCTGTC
dot-bracket secondary structure
(((((((((((((((((((
((((((..(((((((((((....)))))))))..))..))))))))
)))))).)))).)))))))
SIMILARITIES
miRBase
ctr-MIR156
:
0.0000002
PMRD
stu-miR156a
:
2e-42
microPC
miR156
:
2e-42
UniProt
no hits
RFAM
mir-156: 0.000004
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record