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Species belonging to selected taxon:

Brugia malayi, Onchocerca volvulus



ABOUT THIS RECORD

ID: MNEST038095
species: Brugia malayi
miRNA family: mir-2
source: miRBase, original name: bma-mir-2b-1 (MI0013322)

Taxonomy by NCBI:
Brugia malayi Brugia Onchocercidae Filarioidea Spirurida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATCACAGACCCGATGCAGCGA

miRNA*
GTTGTATCGGCTGTGATAT

mismatches: 1
bulges: 2

View larger
pre-miRNA
GAGCGGTAGTTGTATCGGCTGTGATATGTTGTATGATTGGTTGTTGCTCACATCACAGACCCGATGCAGCGACTGCACTTGTGCTACTCCCG

dot-bracket secondary structure
..(((((.(((((((((((((((((.((..(((...........))).)).)))))))..)))))))))).)))))................


SIMILARITIES
miRBase bma-mir-2b-2: 3e-41

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern

references

[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"




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