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Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Cucumis melo subsp. melo
,
Euonymus alatus
,
Euphorbia esula
,
Fagus sylvatica
,
Fragaria vesca
,
Fragaria x ananassa
,
Glycine soja
,
Glycyrrhiza uralensis
,
Hevea brasiliensis
,
Humulus lupulus
,
Jatropha curcas
,
Juglans hindsii x Juglans regia
,
Linum usitatissimum
,
Lotus japonicus
,
Manihot esculenta
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Populus deltoides
,
Populus euphratica
,
Populus nigra
,
Populus tremula
,
Populus tremula x Populus alba
,
Populus tremula x Populus tremuloides
,
Populus tremuloides
,
Populus trichocarpa x Populus nigra
,
Populus x canadensis
,
Prunus armeniaca
,
Prunus persica
,
Quercus petraea
,
Quercus robur
,
Trifolium pratense
,
Bruguiera gymnorhiza
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Populus trichocarpa
,
Phaseolus vulgaris
,
Ricinus communis
,
Populus trichocarpa x Populus deltoides
ABOUT THIS RECORD
ID:
MNEST001540
species:
Medicago sativa
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Medicago sativa
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTACCTCCGTCCCTAATT
miRNA*
TTANGGACNGAGGTAGTATCA
mismatches:
3
bulges:
0
View larger
pre-miRNA
ACGTTAAGAAG
ATACTACCTCCGTCCCTAATT
ATAAGACCCTTTTGAGAATTTTTTTTGTCCCTTTTTATAAGACCCCTTTGCTATTTCCAACTACATTA
ATTATTTCTTTACATACATGCCCCTTTTTATTATACATCTTTTTCTTCAATAAGCAATAAATAACATGTTGAAAACATAAACCAACCCTCTCTCTNNNGG
ATAAAATTGTAAAACCAATANTAATTACAAACATATTTAATACAAAATCCNCTATCTTAATTNCNNNTATTTTTNNAANGNTNCNATA
TTANGGACNGAG
GTAGTATCA
TGTATGAG
dot-bracket secondary structure
..........(
((((((((((.((((.((((.
..((((.....((((((.....((((((....((.(((.(((....((((...(((.((((....(((
.(((((.(((.........................................))).))))).)))...)))).)))..)))).......))).(((...))
).....((((((............))))))..)))...)).)))))).......)))))).........))))..............)
))).)))).)))
)))))))).
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record