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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST048784
species: Nicotiana benthamiana
source: PMRD, original name: nbe-miR156a

Taxonomy by NCBI:
Nicotiana benthamiana Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGAGAGCAC

miRNA*
 GCAGTGGATTGATTATCCCATCCTCGATCA

mismatches: 13
bulges: 19
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pre-miRNA
 TGACAGAAGAGAGAGAGCACCATTGGAATCTGAGACTCCAGAGAAGCAGTTTCCGGAAGGAATAATACCAGGACCAGAATAATTGGCACCCCTAGCAACT
GAACCTTGCAGAACAAGGTCGGATGTCGGATTTTCAGAACTGTTCAGCCAATGACTTTGGAGAAGCTTCCCTGACGCAGTGGATTGATTATCCCATCCTC
GATCA

dot-bracket secondary structure
........((..(((.((....(((((.((...)).))))).(((((...((((....))))...........(((((...((((((....(..(((.((
((.(((((.....))))))))).)))..).......((.....)).))))))...)))))....)))))......)).(.((((.....)))))...)))
..)).


SIMILARITIES
miRBase zma-MIR156j: 0.0006

PMRD nbe-miR157b: 3e-114

microPC miR157: 0.0006		UniProt no hits

RFAM no hits

Identical with: nbe-miR157b from PMRD (MNEST048787)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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