Parental gene:

ENSACAG00000008838

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:AAWZ02035960:18306..32521(+)


>ENSACAG00000008838
CATCAAAGGATTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTCACTCAGAAGGGACAGTTACA
TTCACATCAAAGGACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAACTTCACCCATAGTTCAGGCC
TACGTTCACATCAAAGGATTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTCACTCAGAAGGGA
CAGTTACATTCACATCAAAGGACTCACACTGGGGAGAAACCCTATACATGCCTGGAGTGTGGACAGAACTTCACCCATAG
TTCAGGCCTACGTTCACATCAAAGGATTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTACTC
GGAAGGGACACTTACATTCACATCAAAGGACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTC
ACTCAGAAGGGAAGCTTACATTCACATCAAAGGATTCACACTGGGGAGAAACCCTATACATGCCTGAAGTGTGGACAGAA
CTTCACCTATAGTTCAGGCCTACGTTCACATCAAAGGATTCACACTGGGGAGAAACCCTATAACTGCCTAGAGTGTGGAC
AGAGCTTTGCTCAGAAGGGAAGCTTACATACACATCAAAGGACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGT
GGACAGAGCTTTGCTCGTAGTTCAGGTCTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGA
GTGTGGACAAAGCTTCACTCGTAGTTCAGGACTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCCTATAACTGCC
TGGAGTGTGGACAGAGCTTCACTCATAGTTCAGCACTATGTAGACATCAAAGGACTCACACTGGGGAGAAACCCTATAAC
TGCCTGGAGTGTGGACAGAGCTTTACTCATAGATCAGGCCTACGATCACATGAAAGGACTCACACTGGGGAGAAACCCTA
TAAATGCCTGGAGTGTGGACAGAGCTTCACTCATAGTTCAGGTCTACGTTCACATCAAAGGACTCACACTGGGGAGAAAC
CCTATAACTGCCTGGAGTGTGGACAGAGCTTCACTCATAGTTCAAGCTTACGTAGACATCAAAGGACTCACACTGGGGGG
AAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTCATAGTTCAGGCTTACATAGACATCAAAGGACTCACACTGG
GAAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTCACTCATAGTAATTCAGGCCTACGTACACATCAAAGGACAC
ACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGAAAGAGCTTTACTCGTAGTTCAGTTCTGCGTTCACATGAAAGG
ACTCACACTGGGGAGAAACCCTATACATGCCGGGAGTGTGGAAAGAGCTTTACTCGTAGTTCAGTTCTGCGTTCACATGA
AAGGACTCACACTGGGGAGAAACCCTATACATGCCTGGAGTGTGGACAGAGCTTCACTCATAGTTCAGGCCTACATTCAC
ATCAAAGGACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTCACTCGTAGATCAGACCTACGT
TCACATCAAAGGACTCACACTGGGGAGAAACCCTATACATGCCGGGAGTGTGGAAAGAGCTTTACTCATAGTTCAGGCCT
ACGTAGACATCAAAGAACTCACACTGGGGAGAAACCCTATACATGCCTGGAGTGTGGACAGAGCTTCACTCATAGTTCAG
GCCTACGTAGACATCAAAGAACTCACACTGGGGAGAAACCCTATACATGCCTGGAGTGTGGACAGAGCTTCACTCAGAAT
TCAGACCTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCCTATACATGCCTGGAGTGTGGACAGAGCTTTACTCA
TAGTTCAGGCCTACGTTCACATCAATGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCA
CTCAGAGTTCAGGCCTACGTTCGCATCAATGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGC
TTCACTCAGAGTTCAGGCCTACGTTCACATCAATGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACA
GAGCTTCACTCAGAGTTCAGGCCTACGTTCACATCAATGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTG
GACAGAGC

Library Parental gene expression (RPM)
SRP009831_adrenal 0 .85 RPM
SRP009831_brain 0 .66 RPM
SRP009831_dewlap 0 .84 RPM
SRP009831_embryo 2 .40 RPM
SRP009831_heart 0 .83 RPM
SRP009831_liver 0 .25 RPM
SRP009831_lung 0 .35 RPM
SRP009831_ovary 2 .82 RPM
SRP009831_skeletal_muscle 0 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000023302 within_species_paralog 2 retrogenes
retro_acar_3, retro_acar_34,
Anolis carolinensis ENSACAG00000026389 within_species_paralog 2 retrogenes
retro_acar_13, retro_acar_4,
Anolis carolinensis ENSACAG00000026721 within_species_paralog 1 retrogene
retro_acar_23,
Anolis carolinensis ENSACAG00000026996 within_species_paralog 1 retrogene
retro_acar_22,
Anolis carolinensis ENSACAG00000027062 within_species_paralog 1 retrogene
retro_acar_29,
Ciona savignyi ENSCSAVG00000007589 ortholog_many2many 2 retrogenes
retro_csav_30, retro_csav_31,
Equus caballus ENSECAG00000010608 possible_ortholog 1 retrogene
retro_ecab_68,
Equus caballus ENSECAG00000021667 possible_ortholog 1 retrogene
retro_ecab_560,
Macaca mulatta ENSMMUG00000013571 possible_ortholog 1 retrogene
retro_mmul_248,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_51 80.50 72.68
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Download FASTA sequences of all ENSACAG00000008838 retrocopies