Parental gene: | ENSACAG00000026389 |
| Aliases: | None |
| Description: | None |
| Organism: | Anole lizard (Anolis carolinensis) |
| Coordinates: | GL343787.1:165710..194470(-) |
>ENSACAG00000026389
GAAAAAGCATATAAATGTATTGAATGTGGAAAGAGCTTTAGTCATCATGGAAACCTGAATAGACATCAAAGGACTCACAC
TGGGGAGAAATCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTCAGAGTTCAGGTCTACGTTCACATCAAAGGACTC
ACACTGGGGAGAAACCCTATAACTGTCTGGAGTGTGGACAGAGCTTCACTCAGAAGGGACACTTACATACACATCAAAGA
ACTCACACTAGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTACTCAGAAGGGAAGCTTACATACACATCG
AAGAACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTGCTCATAGTTCAGCACTATATTCAC
ATCAAAGGACCCACACTGGGGAGAAACCCTATAAATGCCTGGACTGTGGACAGAGCTTCACTCAGAAGGGACACTTACAT
ACACATCAAAGAACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTGCTCATAGTTCAGCACT
ATATTCACATCAAAGGACCCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTCAGAAGGGAC
ACTTACATACACATCAAAGAACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTCACTCAGAAG
GGAAGCTTACATAGACATCAAAGAACTCACACTGGGGAGAAACCCTTTAAATGCCTGGAGTGTGGACAGAGCTTTGGTCG
TAGTTCAGGACTACGTTCACATCAAAGGACCCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCA
CTCAGAAGAAGGGAAACTTACATACACATCAAAGGACTCACACTGGGGAGAAACCATATAAATGCCTGGAGTGTGGACAG
AGCTTTACTCAGAAGGGACACTTACATACACATCAAAGGACTCACACTGGGGAGAAACCATATAAATGCCTGGAGTGTGG
ACAGAGCTTCACTCAGAAGGGACACTTACATACACATCAAAGGACTCACACTGGGGAGAAACCATATAAATGCCTGGAGT
GTGGACAGAGCTTTGCTCGTAGTTCAGGACTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCATATAACTGCCTG
GAGTGTGGACAGAGCTTCACTCAGAAGGGACACTTACATACACATCAAAGGACTCACACTGGGGAGAAACCATATAAATG
CCTGGAGTGTGGACAGAGCTTTGCTCAGAGTTCAGGACTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCATATA
AATGCCTGGAGTGTGGACAGAGCTTTGCTCGAAGTTCATATCTACGTAAACATCACAGGATTCACATTGGGGAAAAACCC
TATAAATGCCTTGAGTGTGGACAGAGTTTTACTCGGAAGGGAAGCTTACAAACACATCAAAGAACTCACACTGGTGAGAA
ACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTTGTAGTTCAGGCCTACATTCACATCAAAGGACTCACACTGGGG
AGAAACCCCATAAATGCCTAGAGTGTGAACAGAGCTTCACTCATAGTTCAGGCCTACGTAGACATCAAAGGACTCACACT
GGGGAGAAACCCTTTAAATGCCTGGAGTGTGAACAGAGCTTCACTCAGAGTTCAGGCCTACGTTCACATCAAAGGATTCA
CACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTCACTCGTAGTTCAGGCCTACGTTCCCATCAAAGGA
CTCACACTGGGGAGAAACAATATAAATGCTTGGAGTGTGGACAGAGCTTCACTCATAGTTCAGCTCTACGTAGACATCAA
AGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTTGCTCAGAGTGGAACTTTACGTTCACA
TCAAAGGACTCACACT
GAAAAAGCATATAAATGTATTGAATGTGGAAAGAGCTTTAGTCATCATGGAAACCTGAATAGACATCAAAGGACTCACAC
TGGGGAGAAATCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTCAGAGTTCAGGTCTACGTTCACATCAAAGGACTC
ACACTGGGGAGAAACCCTATAACTGTCTGGAGTGTGGACAGAGCTTCACTCAGAAGGGACACTTACATACACATCAAAGA
ACTCACACTAGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTACTCAGAAGGGAAGCTTACATACACATCG
AAGAACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTGCTCATAGTTCAGCACTATATTCAC
ATCAAAGGACCCACACTGGGGAGAAACCCTATAAATGCCTGGACTGTGGACAGAGCTTCACTCAGAAGGGACACTTACAT
ACACATCAAAGAACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTGCTCATAGTTCAGCACT
ATATTCACATCAAAGGACCCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTCAGAAGGGAC
ACTTACATACACATCAAAGAACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTCACTCAGAAG
GGAAGCTTACATAGACATCAAAGAACTCACACTGGGGAGAAACCCTTTAAATGCCTGGAGTGTGGACAGAGCTTTGGTCG
TAGTTCAGGACTACGTTCACATCAAAGGACCCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCA
CTCAGAAGAAGGGAAACTTACATACACATCAAAGGACTCACACTGGGGAGAAACCATATAAATGCCTGGAGTGTGGACAG
AGCTTTACTCAGAAGGGACACTTACATACACATCAAAGGACTCACACTGGGGAGAAACCATATAAATGCCTGGAGTGTGG
ACAGAGCTTCACTCAGAAGGGACACTTACATACACATCAAAGGACTCACACTGGGGAGAAACCATATAAATGCCTGGAGT
GTGGACAGAGCTTTGCTCGTAGTTCAGGACTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCATATAACTGCCTG
GAGTGTGGACAGAGCTTCACTCAGAAGGGACACTTACATACACATCAAAGGACTCACACTGGGGAGAAACCATATAAATG
CCTGGAGTGTGGACAGAGCTTTGCTCAGAGTTCAGGACTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCATATA
AATGCCTGGAGTGTGGACAGAGCTTTGCTCGAAGTTCATATCTACGTAAACATCACAGGATTCACATTGGGGAAAAACCC
TATAAATGCCTTGAGTGTGGACAGAGTTTTACTCGGAAGGGAAGCTTACAAACACATCAAAGAACTCACACTGGTGAGAA
ACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTTGTAGTTCAGGCCTACATTCACATCAAAGGACTCACACTGGGG
AGAAACCCCATAAATGCCTAGAGTGTGAACAGAGCTTCACTCATAGTTCAGGCCTACGTAGACATCAAAGGACTCACACT
GGGGAGAAACCCTTTAAATGCCTGGAGTGTGAACAGAGCTTCACTCAGAGTTCAGGCCTACGTTCACATCAAAGGATTCA
CACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTCACTCGTAGTTCAGGCCTACGTTCCCATCAAAGGA
CTCACACTGGGGAGAAACAATATAAATGCTTGGAGTGTGGACAGAGCTTCACTCATAGTTCAGCTCTACGTAGACATCAA
AGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTTGCTCAGAGTGGAACTTTACGTTCACA
TCAAAGGACTCACACT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP009831_adrenal | 2 .23 RPM |
| SRP009831_brain | 5 .02 RPM |
| SRP009831_dewlap | 1 .94 RPM |
| SRP009831_embryo | 7 .56 RPM |
| SRP009831_heart | 5 .71 RPM |
| SRP009831_liver | 0 .94 RPM |
| SRP009831_lung | 4 .33 RPM |
| SRP009831_ovary | 1 .35 RPM |
| SRP009831_skeletal_muscle | 0 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000008838 | within_species_paralog | 1 retrogene | |
| Anolis carolinensis | ENSACAG00000023302 | within_species_paralog | 2 retrogenes | |
| Anolis carolinensis | ENSACAG00000026721 | within_species_paralog | 1 retrogene | |
| Anolis carolinensis | ENSACAG00000026996 | within_species_paralog | 1 retrogene | |
| Anolis carolinensis | ENSACAG00000027062 | within_species_paralog | 1 retrogene | |
| Ciona savignyi | ENSCSAVG00000007589 | ortholog_many2many | 2 retrogenes | |
| Equus caballus | ENSECAG00000010608 | possible_ortholog | 1 retrogene | |
| Equus caballus | ENSECAG00000021667 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013571 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_acar_4 | 69.13 | 76.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_acar_13 | 85.14 | 92.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSACAG00000026389 retrocopies