Parental gene:

ENSACAG00000026721

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL344252.1:17356..19970(-)


>ENSACAG00000026721
ACTGCTGTGAGCAATCAGAAAGGAAAAAACAAGAATCAAGCGTCCTTATTGGAATTAAATGTACATAGCACTGTTGACAT
GGAGGAGAAAGCATATAAATGTATTGAATGTGGAAAGAGATTTAGTTATAGTTCAACTCTACAAACACATCAAAGGACTC
ACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTCATAGTTCATATCTACGTAAACATCACAGG
ATTCACATTGGGGAAAAACCCTATAAATGCCTTGAGTGTGGACAGAGTTTTACTCGGAAGGGAAGCTTACAAACACATCA
AAGAACTCACACTGGTGAGAAACCCTATAAATGCCTGGAGTGTGAACAGAGCTTCACTCGGAGTTCAGCTCTACGTATAC
ATCAATGGACTCACACTGGGGAGAAACCCTTTAAATGCCTGGAGTGTGAACAGAGCTTCACTCGGAGTTCAGCTCTACGT
ATACATCAATGGACTCACACTGGGGAGAAACCCTTTAAATGCCTGGAGTGTGAACAGCGCTTCACTCGGAGTTCAGATCT
ACATTCACATCAAAGGACTCACACTGGGGAGAAGCCCTATAAATGCCTGGAGTGTGGACAGAGCTTTGCCCATAGTTCAG
GACTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCCTATAAATGCCTAGAGTGTGAACAGAGCTTCTCTCGGAGT
TCAGCTCTACGTATACATCAATGGACTCACACTGGGGAGAAACCCTTTAAATGCCTGGAGTGTGAACAGAGCTTCACTCG
GAGTTCAGATCTACATTCACATCAAAGGACTCACACTGGGGAGAAACCCTATAAATGCTTGGAGTGTGGACAGAGCTTTG
CCCATAGTTCAGGCCTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGAACAGAGC
TTCACTCAGAAGGGAAGCTTACATAGACATCAAAGGACTCACACTGGGGAGAAGCCCTATAAATGCCTGGAGTGTGGACA
GAGCTTCACTCAGAGTTCACATCTACATAGACATCAAAGGACCCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTG
GACAGAGCTTTGCCCATAGTTCAGGACTACGTTCACATCAAAGGACCCACACTGGGGAGAAGCCCTATAAATGCCTGGAG
TGTGGACAGAGCTTCTCTCATAATTCACATCTACATAGACATCAAAGGACCCACACTGGGGAGAAACCCTATAACTGCCT
GGAGTGTGGACAGAGCTTCACTGAGAAGGGAAGCTTACATAAACATCAAAGGACTCACACTGGGGAGAAACCCTATAAAT
GCCTGGAGTGTGGACAGAGCTTCACTCAGAGTTCAGGACTACGTAGACATCAAAGGACCCACACTGGGGAGAAACCCTAT
AACTGCCTGGAGTGTGGACAGAGCTTTGCTCATAGTTCAGGTCTACGTTCACATCAAAGGACTCACACTGGAGAGAAACC
CTATAACTGCCTGGAGTGTGGACAGAGCTTTGCTCGTAGTTCAGGTCTACGTTCCCATCAAAGGACTCACACTGGAGAGA
AACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTGCTCGTAGTTCAGGACTATGTTCCCATCAAAGGACCCACACTGGG
GAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTCATTGATTGTTCAACTCTACGTTCACATCAAAGGACCCACAC
TGGGGAGAAACCCTATAAATGCCTGGAGTGTGGGCAGAGCTTTGCTCGTAGTTCAGCTCTACGTTCACATCAAAGGACCC
ACACTGAGGAGAAACCTTATAAATGCCTGGAGTGTGGACAGAGCTTTACTCAGAGGGGACATTTACGCTCCCATCAAAGG
ACCCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGCCAGAGCTTTGCTGTTAGTTCAGGTCTACGTTCACATCA
AAAGACGCACACTGGGGAGAAACCATGTAAATGCCTGGAGTGTGGACAGAGCTTTACTCAGGGGGGACATTTACGTTCAC
ATGAAAGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGGCTGTGGCCAGAGCTTTGCTTGTAGTTCAGGACTACGT
TCACATCAAAGGACTCACACTGGGGATAAACCCTATAACTGCTTGGAGTGTGGACAGAGCTTCTCTCATAATTCGCATCT
ACATAGACATCAAAGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGGCTGTGGCCAGAGCTTTGCTTGTAGTTCAG
GACTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCATAG

Library Parental gene expression (RPM)
SRP009831_adrenal 11 .09 RPM
SRP009831_brain 0 .52 RPM
SRP009831_dewlap 1 .48 RPM
SRP009831_embryo 8 .24 RPM
SRP009831_heart 12 .24 RPM
SRP009831_liver 3 .11 RPM
SRP009831_lung 7 .30 RPM
SRP009831_ovary 3 .44 RPM
SRP009831_skeletal_muscle 1 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008838 within_species_paralog 1 retrogene
retro_acar_51,
Anolis carolinensis ENSACAG00000023302 within_species_paralog 2 retrogenes
retro_acar_3, retro_acar_34,
Anolis carolinensis ENSACAG00000026389 within_species_paralog 2 retrogenes
retro_acar_13, retro_acar_4,
Anolis carolinensis ENSACAG00000026996 within_species_paralog 1 retrogene
retro_acar_22,
Anolis carolinensis ENSACAG00000027062 within_species_paralog 1 retrogene
retro_acar_29,
Ciona savignyi ENSCSAVG00000007589 ortholog_many2many 2 retrogenes
retro_csav_30, retro_csav_31,
Equus caballus ENSECAG00000010608 possible_ortholog 1 retrogene
retro_ecab_68,
Equus caballus ENSECAG00000021667 possible_ortholog 1 retrogene
retro_ecab_560,
Macaca mulatta ENSMMUG00000013571 possible_ortholog 1 retrogene
retro_mmul_248,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_23 73.67 78.65
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Download FASTA sequences of all ENSACAG00000026721 retrocopies