Parental gene:

ENSACAG00000027062

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL344453.1:12296..14600(+)


>ENSACAG00000027062
TGCTGTAAGAGTGGAGATCTATGTTCAAATCAAAAGACTCACACTGGAGAGAAACCCTATACATGCCTGGAGTGCGGAAA
GAGCTTTGCTCAGAGTGCATATCTATGTTCACATCAAAGGATTCACACTGGGGAGAAACCCTATACATGCCTGGAGTGTG
GACAGAGCTTCACTCGGAGTTCAAGTCTATGTTCACATCAAAGGACTCACACTGGGGAAAAACCATTTAAATGCCTAGAG
TGTGGACAGAGCTTCACTGAGAGTGGAAGTCTACGAACACATCAAAGGACTCACACTGGGGAGAAACCCTATACATGCCT
GGAGTGTGGAAAGAGCTTCACTGAGCGTTCAAGTCTTCGTTTACATCAAAGGACTCACACTGGGGAGAAACCCTATGCAT
GCCTGGAGTGTGGAAAGAGCTTTGCTCAGAAAGGACATCTAGATTCACATCAACGGACTCACACTGGGGAGAAACCCTAT
ACATGCCAAGAGTGTGGAATGAGCTTCGCTCAGAGTTCAAATCTACATTCACATCAACGGACTCACACAGGGGAGAAACC
CTGTAAATGCCTGGTGTGTGGACAGAGCTTTACTAAGAATTCAAGTCTACGTTTGCATGAAATGACTCACACTGGGGAGA
AACCCTATACATGCCAGGAGTGCGGACAGAGCTTTACTAAGAATTCAAGTCTACGTTTGCATGAAATGACTCACACTGGG
GAGAAACCCTATACATGCCAGGAGTGTGGTCAGAGCTTTACTAAGCATTCAAGTCTACGTTTGCATCAAATGACTCACAC
TGGGGAGAAACCCTATACATGCCAAGAGTGTGGAAAGAGCTTTACTCAGAGTTCAAATCTATATTCACATCAACGGACTC
ACACAGGGGAGAAACCCTGTAAATGCCTGGAGTGTGGACAGAGCTTTACTACGAATTCAAGTCTACGTTTGCATCAAATG
ACTCACACTGGGGAGAAACCCTATACATGCCAGGAGTGTGGAAAGAGCTTTACTAAGAATTCAAGTCTACGTTTGCATCA
ACGGACTCATACTGGGGAGAAACCCTATACATGCCAGGAGTGTGGAAGGAGCTTCACTGAGAGTTCTAATCTACGTTCAC
ATCAATGGACTCACACAGGGGAGAAACCCTATACATGCTTGGAGTGTGGAATGAGTTTTGCTCATAGTTCAGCTGTACGT
TTACATCAGCGGACTCACACTGGAGAGAAACCATATACATGCCTGGAGTGTGGACAGAGCTTCACTCAGAGTTCAGGTCT
ACGTTTACATAAAAGGACTCATACTGGAGAGAAACCCTATACATGCCAGGAGTGTGGAAGGAGCTTCACTGAGAGTTCTA
AACTACGTTCACATCAATGGACTCACACAGGAGAGAAACCCTATACGTGCCTGGAGTGTGGACAAGGCTTCACTAAGAGT
TCACGTCTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCTTATACGTGCCTGGAGTGTGGACAGAGCTTTACTAA
TAGTTCAAGTCTACGTTTACATCAAAGGACTCACACTGGAGAGAAACCCTATACATGCCTGGAGTGTGGAATGAGTTTTA
CCCATAGTTCAGGTTTGTGTAGACATCGAAGGACTCACACTGGGGAGAAACCCTATACATGCCCGGAGTGTGGAAAGAGC
TTCACTCGGAGTGCAGCTCTACGTTTACATCAAAGGACTCACACTGGGGAGAAACCCTATACATGCCTGGAGTGTGGAAA
GAGCTTCACTCAGAGTGGAAAACTACGTTTGCATCAACGGACTCACACTGGGGAGAAACCCTATACGTGCCTGGAGTGTG
GACAAAGCTTCACTCAGAGTTCAGGTCTACGTTTACATCAAAGGACTCACACTGGAGAGAAACCCTCTGCATGTCTCGAG
GGTGGACAGAGCTTCACTGAGAGTGGAAGTCTTATGTTC

Library Parental gene expression (RPM)
SRP009831_adrenal 7 .71 RPM
SRP009831_brain 5 .92 RPM
SRP009831_dewlap 2 .02 RPM
SRP009831_embryo 28 .04 RPM
SRP009831_heart 8 .04 RPM
SRP009831_liver 3 .68 RPM
SRP009831_lung 6 .45 RPM
SRP009831_ovary 1 .89 RPM
SRP009831_skeletal_muscle 1 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008838 within_species_paralog 1 retrogene
retro_acar_51,
Anolis carolinensis ENSACAG00000023302 within_species_paralog 2 retrogenes
retro_acar_3, retro_acar_34,
Anolis carolinensis ENSACAG00000026389 within_species_paralog 2 retrogenes
retro_acar_13, retro_acar_4,
Anolis carolinensis ENSACAG00000026721 within_species_paralog 1 retrogene
retro_acar_23,
Anolis carolinensis ENSACAG00000026996 within_species_paralog 1 retrogene
retro_acar_22,
Ciona savignyi ENSCSAVG00000007589 ortholog_many2many 2 retrogenes
retro_csav_30, retro_csav_31,
Equus caballus ENSECAG00000010608 possible_ortholog 1 retrogene
retro_ecab_68,
Equus caballus ENSECAG00000021667 possible_ortholog 1 retrogene
retro_ecab_560,
Macaca mulatta ENSMMUG00000013571 possible_ortholog 1 retrogene
retro_mmul_248,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_29 76.03 81.78
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Download FASTA sequences of all ENSACAG00000027062 retrocopies