Parental gene: | ENSCSAVG00000007589 |
| Aliases: | None |
| Description: | None |
| Organism: | Pacific transparent sea squirt (Ciona savignyi) |
| Coordinates: | reftig_41:1626873..1644033(+) |
>ENSCSAVG00000007589
ATGACTCACACTGGCCAGATGCCTTATAAGTGTGATGTGTGTGAGAAAACCTTCCGACAAAGTAGCAATATGAGGACGCA
CAAAGCAACTCACAACAAAGAAAAAACAATAAAATGTGACGTTTGTGGAAATATGTTTGCTACACAAATGCATCTAAATA
AACACCAAAAAATTCATTCTGAACGGAATAGGCTGTACAAATGTGATGTCTGTGAAAAGTCGTTCCGTCAGAGACCTGGT
TTAAATTCGCACCGAAAAATTCATGAGGGTGAGAAACCATTCAAATGTGAAACATGCGGGAAATTATTTGGTACAAGTTC
ACAGATGAAGAAACACGAAAAGATTCACACTGACGAGAAACCACCATTTTCGTGTGATGTGTGTGAAAAGACATTTGTTT
ATGCCACCGGATTGAATCTCCACAAGAAACTTCACACTGCTGAAAGGCCATACAAATGCAGTTTCTGCGAAAAATCATTT
ACAAGAAGTCATCATTTGAAAATACATCACATGACTCACACTGGCCAGATGCCTTATAAGTGTGATGTGTGTGAGAAAAC
CTTCCGACAAAGTAGCAATATGAGGACGCACAAAGCAACTCACAACAAAGAAAAAACAATAAAATGTGATGTTTGTGAAA
ATATGTTTGCTACACAAATGCATCTAAATAAACACCGAAAAATTCATTCTGAACGGAGTAAATTCAAATGCAATGTATGT
GAAAAGTCATACAACTCTGCCCTTGCCTTGAAAATACACCAACGTTCACACAGTGATGAGAGGCCATACAAATGTGAAGT
TTGCGATCGAAGCTTTCGTGACGGTTCAGTCCTCAAAAAACATAAAACAATTCATACTGGAGAGAAACCTCACAAATGCG
ATGTTTGTGAGAAATCATTTAGATCGGCTGGCTATTTAAAAGCACACCAACTGATACACGGTGAAGATAGGCTGTACAAA
TGTGATGTCTGTGAAAAGTCGTTCCGTCAGAGACCTGGTTTAAATTCGCACCGAAAAATTCATGAGGGTGAGAAACCATT
CAAATGTGAAACATGCGGGAAATTATTTGGTACAAGTTCACAGATGAAGAAACACGAAAAGATTCACACTGACGAGAAAC
CGTTTACATGCACCATTTGCGAACGTAGCTTTCTTCTCTCTAAGTGCCTAAAACAACATGAACGAATTCACACCGGAGAG
AAACCTTACAAATGTGACATTTGCCAGAGAATGTTTAGTTTAAAATGCAAATTAAATATACATATGAAGACTCATACTGG
AGAAAGACCATTTTCGTGTGGTGTGTGTGAAAAAACATTTGTTTATGCCACCGGATTGAATCTCCACAAGAAACTTCACA
CTGCTGAAAGGCCATACAAATGCAGTTTCTGCGAAAAATCATTTACAAGAAGTCATCATTTGAAAATACATCACATGACT
CACACTGGCCAGATGCCTTATAAGTGTGATGTGTGTGAGAAAACCTTCCGACAAAGTAGCAATTTGAGTTCCCATAAAGC
AACTCACAACAAAGAAAAAACAATAAAATGTGATGTTTGTGAAAATATGTTTGCTACACAAATGCATCTAAATAAACACC
GAAAAATTCATTCTGAATGGAGTAAAGTCAAATGCAATGTATGTGAAAAGTCATGCAGCTCTGCTGCTGCCTTGAAAATA
CACCAACGTTCACACAGTGATGAGAGGCCATACAAATGTGAAGTTTGCGATCGAAGCTTTCGTGACGGTTCAGACCTCAG
AAAACATAAAACAATTCATACTGGAGAGAAACCATACAAATGTAATGTTTGTGGAAAATCATTTAGATTGATAGGTGATG
TAAAATCGCACCAAATGATCCACGGTGAAGAAAGGCTGTACAAATGTGATGTCTGTGAAAAGTCCTTTCGTCAGAGATCT
AGTTTAAGTTCGCATCGAAAAATTCATGCGGGTGTGAAACTGTACAAGTGTGAAACATGCGGAAAATTATTTGGTACAAG
TTCAGATATGAAGAAACACGAAAGGATTCACACCGGAGAGAAACCTTACAAATGTAACATTTGCCAGAGAATGTTTAGTT
GTCGAAGCAACATGACAAAACACCAAGCAAGGCATTGA
ATGACTCACACTGGCCAGATGCCTTATAAGTGTGATGTGTGTGAGAAAACCTTCCGACAAAGTAGCAATATGAGGACGCA
CAAAGCAACTCACAACAAAGAAAAAACAATAAAATGTGACGTTTGTGGAAATATGTTTGCTACACAAATGCATCTAAATA
AACACCAAAAAATTCATTCTGAACGGAATAGGCTGTACAAATGTGATGTCTGTGAAAAGTCGTTCCGTCAGAGACCTGGT
TTAAATTCGCACCGAAAAATTCATGAGGGTGAGAAACCATTCAAATGTGAAACATGCGGGAAATTATTTGGTACAAGTTC
ACAGATGAAGAAACACGAAAAGATTCACACTGACGAGAAACCACCATTTTCGTGTGATGTGTGTGAAAAGACATTTGTTT
ATGCCACCGGATTGAATCTCCACAAGAAACTTCACACTGCTGAAAGGCCATACAAATGCAGTTTCTGCGAAAAATCATTT
ACAAGAAGTCATCATTTGAAAATACATCACATGACTCACACTGGCCAGATGCCTTATAAGTGTGATGTGTGTGAGAAAAC
CTTCCGACAAAGTAGCAATATGAGGACGCACAAAGCAACTCACAACAAAGAAAAAACAATAAAATGTGATGTTTGTGAAA
ATATGTTTGCTACACAAATGCATCTAAATAAACACCGAAAAATTCATTCTGAACGGAGTAAATTCAAATGCAATGTATGT
GAAAAGTCATACAACTCTGCCCTTGCCTTGAAAATACACCAACGTTCACACAGTGATGAGAGGCCATACAAATGTGAAGT
TTGCGATCGAAGCTTTCGTGACGGTTCAGTCCTCAAAAAACATAAAACAATTCATACTGGAGAGAAACCTCACAAATGCG
ATGTTTGTGAGAAATCATTTAGATCGGCTGGCTATTTAAAAGCACACCAACTGATACACGGTGAAGATAGGCTGTACAAA
TGTGATGTCTGTGAAAAGTCGTTCCGTCAGAGACCTGGTTTAAATTCGCACCGAAAAATTCATGAGGGTGAGAAACCATT
CAAATGTGAAACATGCGGGAAATTATTTGGTACAAGTTCACAGATGAAGAAACACGAAAAGATTCACACTGACGAGAAAC
CGTTTACATGCACCATTTGCGAACGTAGCTTTCTTCTCTCTAAGTGCCTAAAACAACATGAACGAATTCACACCGGAGAG
AAACCTTACAAATGTGACATTTGCCAGAGAATGTTTAGTTTAAAATGCAAATTAAATATACATATGAAGACTCATACTGG
AGAAAGACCATTTTCGTGTGGTGTGTGTGAAAAAACATTTGTTTATGCCACCGGATTGAATCTCCACAAGAAACTTCACA
CTGCTGAAAGGCCATACAAATGCAGTTTCTGCGAAAAATCATTTACAAGAAGTCATCATTTGAAAATACATCACATGACT
CACACTGGCCAGATGCCTTATAAGTGTGATGTGTGTGAGAAAACCTTCCGACAAAGTAGCAATTTGAGTTCCCATAAAGC
AACTCACAACAAAGAAAAAACAATAAAATGTGATGTTTGTGAAAATATGTTTGCTACACAAATGCATCTAAATAAACACC
GAAAAATTCATTCTGAATGGAGTAAAGTCAAATGCAATGTATGTGAAAAGTCATGCAGCTCTGCTGCTGCCTTGAAAATA
CACCAACGTTCACACAGTGATGAGAGGCCATACAAATGTGAAGTTTGCGATCGAAGCTTTCGTGACGGTTCAGACCTCAG
AAAACATAAAACAATTCATACTGGAGAGAAACCATACAAATGTAATGTTTGTGGAAAATCATTTAGATTGATAGGTGATG
TAAAATCGCACCAAATGATCCACGGTGAAGAAAGGCTGTACAAATGTGATGTCTGTGAAAAGTCCTTTCGTCAGAGATCT
AGTTTAAGTTCGCATCGAAAAATTCATGCGGGTGTGAAACTGTACAAGTGTGAAACATGCGGAAAATTATTTGGTACAAG
TTCAGATATGAAGAAACACGAAAGGATTCACACCGGAGAGAAACCTTACAAATGTAACATTTGCCAGAGAATGTTTAGTT
GTCGAAGCAACATGACAAAACACCAAGCAAGGCATTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000008838 | ortholog_many2many | 1 retrogene | |
| Anolis carolinensis | ENSACAG00000023302 | ortholog_many2many | 2 retrogenes | |
| Anolis carolinensis | ENSACAG00000026389 | ortholog_many2many | 2 retrogenes | |
| Anolis carolinensis | ENSACAG00000026721 | ortholog_many2many | 1 retrogene | |
| Anolis carolinensis | ENSACAG00000026996 | ortholog_many2many | 1 retrogene | |
| Anolis carolinensis | ENSACAG00000027062 | ortholog_many2many | 1 retrogene | |
| Equus caballus | ENSECAG00000010608 | ortholog_many2many | 1 retrogene | |
| Equus caballus | ENSECAG00000021667 | ortholog_many2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013571 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_csav_30 | 74.23 | 57.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_csav_31 | 72.16 | 57.25 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCSAVG00000007589 retrocopies