Parental gene:

ENSACAG00000026996

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:AAWZ02036460:61..21964(-)


>ENSACAG00000026996
GAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTCGCTGATAGTTCAGGCCTACGTTCCCATCAAAGGACTCACAC
TGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTGCTCATAGTTCAGGACTACGTTCCCATCAAAGGACTC
ACACTGGGGAGAAACCCTATAAATGCCTGGAATGTGAACAGACCTTCGCTCAGATTTCAACTTTACATTCACATCAAAGA
ACTCACACTGGGGAGAAACCCTTTAAATGCCTGGAGTGTGGACAGAGCTGCACTCACAGTTCAGACTTACGTTCACATCA
AAGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCGCTCAAAGTGGAAACCTAAGTTCAC
ATCAAAGGACCCACACAGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCGCTCGTAGTTCAGGTCTACGT
TCACATCATAGGACTCACACTAGGGAGAAACCCAATAACTGTCTGGAGTGTGGAAAGAGCTTTGCTCATAGTTCAGGGCT
ACGTTTACATCAAAGGACTCACACTGGGGAGAAGCCCTATGAATGCTTGGAGTGTGGACAGAGCTTCAGTGATTGTTCAA
CTCTACGTAGACATCAAAGGACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTGCTCATAGT
TCAGGACTACGTTCCCATCAAAGGACTCACACTGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGCTTTGCTCA
TAGTTCAGGACTACGTTCCCATCTAAGGACTCACACTGGGGAGAAACCCTATAAATGCTTGGAGTGTGGACAGAGCTTCG
CTCGTAGGGGAAATCTAGTTTCACATCAAAAGAGAACTCACACTGGGGAGAAACCCTTTAGATGCCTGGAGTGTGGACTG
AGCTTCACTCACAATTCAGAGTTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGG
ACAGAGCTTCGCTCAAAGTGGAAACCTAAGTTCACATCAAAGGACCCACACAGGGGAGAAACCCTATAAATGTCTGGAGT
GTGGACAGAGCTTCGCTCGTAGTTCAACTCTCCATGCACATCAAAGGACTCACACTGGGGAGAAACCCTATAACTGCCTT
CAGTGTGGACAGAGCTTCACTCATAGTTCAAGTCTACGTAGACATCAAAGGACTCACACTGGGGAGAAACCCTTTAAATG
CCTGGAGTGTGGACAGAGCTTCACTCAGAGTTCAGGTCTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCCTTTA
AATGCCTGGAGTGTGGACAGAGCTTCACGTATAGTTCGTGCCTACGTAAACATCAAAGGACTCACACTGGGGAGAAACCC
TATAAATGCCTGGAGTGTGGACAAAGCTTTGCTGATAGTTCAGGCCTACGTTCACATCAAAGCATTCATACTGGGGAGAA
ACCCTTTAAATGCCTGGAGTGTGGACAGAGCTTCACTCAAAGTTTAGGTCTACGTAGACATCAAAGGACTCACACTGGGG
AGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTCATAGTTCAGGTCTACGTAGACATCAAAGGACTCACACT
GGGGAGAAA

Library Parental gene expression (RPM)
SRP009831_adrenal 0 .16 RPM
SRP009831_brain 0 .33 RPM
SRP009831_dewlap 2 .15 RPM
SRP009831_embryo 0 .33 RPM
SRP009831_heart 0 .42 RPM
SRP009831_liver 0 .00 RPM
SRP009831_lung 0 .10 RPM
SRP009831_ovary 0 .77 RPM
SRP009831_skeletal_muscle 0 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008838 within_species_paralog 1 retrogene
retro_acar_51,
Anolis carolinensis ENSACAG00000023302 within_species_paralog 2 retrogenes
retro_acar_3, retro_acar_34,
Anolis carolinensis ENSACAG00000026389 within_species_paralog 2 retrogenes
retro_acar_13, retro_acar_4,
Anolis carolinensis ENSACAG00000026721 within_species_paralog 1 retrogene
retro_acar_23,
Anolis carolinensis ENSACAG00000027062 within_species_paralog 1 retrogene
retro_acar_29,
Ciona savignyi ENSCSAVG00000007589 ortholog_many2many 2 retrogenes
retro_csav_30, retro_csav_31,
Equus caballus ENSECAG00000010608 possible_ortholog 1 retrogene
retro_ecab_68,
Equus caballus ENSECAG00000021667 possible_ortholog 1 retrogene
retro_ecab_560,
Macaca mulatta ENSMMUG00000013571 possible_ortholog 1 retrogene
retro_mmul_248,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_22 91.79 84.37
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSACAG00000026996 retrocopies