Parental gene: | ENSAMEG00000007786 |
| Aliases: | None |
| Description: | Elongation factor 1-alpha [Source:UniProtKB/TrEMBL;Acc:G1LMH6] |
| Organism: | Panda (Ailuropoda melanoleuca) |
| Coordinates: | GL192488.1:789028..791204(+) |
>ENSAMEG00000007786
AAACCACCGCTTAACCTAAACCAAAATGGGAAAGGAAAAGACTCACATATCGTCGTCATTGGACACGTAGATTCGGGCAA
GTCTACCACTACTGGTCATCTGATCTACAAATGTGGTGGGATCGACAAAAGAACTATTGAGAAATTCGAGAAGGAGGCTG
CTGAGATGGGAAAGGGCTCCTTCAAGTATGCCTGGGTCTTGGATAAACTAAAAGCTGAACGTGAACGTGGTATCACCATT
GATATCTCCCTGTGGAAATTCGAGACCAGCAAGTATTACGTGACCATTATCGATGCCCCAGGACACAGAGACTTCATCAA
AAACATGATTACAGGAACATCTCAGGCTGACTGTGCTGTCCTGATTGTTGCTGCTGGTGTTGGTGAATTTGAAGCAGGTA
TCTCCAAGAATGGGCAGACCCGTGAGTATGCCCTGTTGGCTTACACACTGGGTGTAAAACAGCTGATTGTTGGTGTTAAC
AAAATGGATTCCACTGAGCCACCCTACAGCCAGAAGAGATACGAGGAAATTGTTAAGGAAGTCAGCACCTACATTAAGAA
AATTGGCTACAACCCCGACACAGTAGCATTTGTGCCAATTTCTGGTTGGAATGGTGACAACATGCTGGAGCCAAGTGCTA
ACATGCCTTGGTTCAAGGGATGGAAAGTCACCCGTAAAGATGGGAACGCCAGTGGAACCACACTGCTTGAAGCTCTGGAT
TGCATTCTGCCACCAACTCGTCCTACTGACAAGCCCTTGCGTCTGCCTCTCCAGGATGTCTACAAAATTGGTGGTATTGG
TACTGTCCCTGTGGGCCGAGTGGAGACTGGTGTTCTGAAACCTGGCATGGTGGTCACCTTTGCTCCAGTCAATGTTACAA
CTGAAGTAAAGTCTGTTGAAATGCACCATGAAGCGTTGAGTGAGGCTCTTCCTGGGGACAATGTGGGCTTCAATGTCAAG
AACGTATCTGTCAAAGATGTTCGTCGTGGCAATGTGGCTGGTGACAGCAAAAATGACCCACCAATGGAGGCAGCTGGTTT
CACGGCTCAGGTGATTATCCTGAACCATCCAGGCCAAATCAGTGCTGGATATGCACCTGTGCTGGATTGTCACACAGCTC
ACATTGCTTGCAAGTTCGCTGAGCTGAAGGAGAAGATAGATCGTCGTTCTGGGAAAAAGCTGGAAGATGGTCCCAAGTTC
TTGAAATCTGGTGATGCTGCCATTGTTGATATGGTTCCTGGCAAGCCTATGTGTGTTGAGAGCTTCTCTGACTATCCTCC
TCTGGGCCGTTTTGCAGTTCGTGACATGAGACAGACGGTTGCTGTGGGTGTCATCAAAGCGGTGGACAAGAAGGCAGCTG
GAGCTGGCAAGGTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAAA
AAACCACCGCTTAACCTAAACCAAAATGGGAAAGGAAAAGACTCACATATCGTCGTCATTGGACACGTAGATTCGGGCAA
GTCTACCACTACTGGTCATCTGATCTACAAATGTGGTGGGATCGACAAAAGAACTATTGAGAAATTCGAGAAGGAGGCTG
CTGAGATGGGAAAGGGCTCCTTCAAGTATGCCTGGGTCTTGGATAAACTAAAAGCTGAACGTGAACGTGGTATCACCATT
GATATCTCCCTGTGGAAATTCGAGACCAGCAAGTATTACGTGACCATTATCGATGCCCCAGGACACAGAGACTTCATCAA
AAACATGATTACAGGAACATCTCAGGCTGACTGTGCTGTCCTGATTGTTGCTGCTGGTGTTGGTGAATTTGAAGCAGGTA
TCTCCAAGAATGGGCAGACCCGTGAGTATGCCCTGTTGGCTTACACACTGGGTGTAAAACAGCTGATTGTTGGTGTTAAC
AAAATGGATTCCACTGAGCCACCCTACAGCCAGAAGAGATACGAGGAAATTGTTAAGGAAGTCAGCACCTACATTAAGAA
AATTGGCTACAACCCCGACACAGTAGCATTTGTGCCAATTTCTGGTTGGAATGGTGACAACATGCTGGAGCCAAGTGCTA
ACATGCCTTGGTTCAAGGGATGGAAAGTCACCCGTAAAGATGGGAACGCCAGTGGAACCACACTGCTTGAAGCTCTGGAT
TGCATTCTGCCACCAACTCGTCCTACTGACAAGCCCTTGCGTCTGCCTCTCCAGGATGTCTACAAAATTGGTGGTATTGG
TACTGTCCCTGTGGGCCGAGTGGAGACTGGTGTTCTGAAACCTGGCATGGTGGTCACCTTTGCTCCAGTCAATGTTACAA
CTGAAGTAAAGTCTGTTGAAATGCACCATGAAGCGTTGAGTGAGGCTCTTCCTGGGGACAATGTGGGCTTCAATGTCAAG
AACGTATCTGTCAAAGATGTTCGTCGTGGCAATGTGGCTGGTGACAGCAAAAATGACCCACCAATGGAGGCAGCTGGTTT
CACGGCTCAGGTGATTATCCTGAACCATCCAGGCCAAATCAGTGCTGGATATGCACCTGTGCTGGATTGTCACACAGCTC
ACATTGCTTGCAAGTTCGCTGAGCTGAAGGAGAAGATAGATCGTCGTTCTGGGAAAAAGCTGGAAGATGGTCCCAAGTTC
TTGAAATCTGGTGATGCTGCCATTGTTGATATGGTTCCTGGCAAGCCTATGTGTGTTGAGAGCTTCTCTGACTATCCTCC
TCTGGGCCGTTTTGCAGTTCGTGACATGAGACAGACGGTTGCTGTGGGTGTCATCAAAGCGGTGGACAAGAAGGCAGCTG
GAGCTGGCAAGGTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013249 | possible_ortholog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000009629 | possible_ortholog | 1 retrogene | |
| Equus caballus | ENSECAG00000022260 | possible_ortholog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000000342 | possible_ortholog | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000028081 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000018533 | possible_ortholog | 4 retrogenes | |
| Mus musculus | ENSMUSG00000037742 | possible_ortholog | 15 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000007687 | possible_ortholog | 4 retrogenes | |
| Drosophila melanogaster | FBgn0000557 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_amel_160 | 83.40 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_amel_200 | 77.64 | 52.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_amel_1064 | 94.44 | 61.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_amel_1072 | 73.96 | 60.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_amel_1079 | 69.23 | 54.37 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_amel_1140 | 62.54 | 60.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_amel_1167 | 60.56 | 59.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_amel_1203 | 83.22 | 90.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_amel_1227 | 82.87 | 69.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_amel_1283 | 77.92 | 98.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_amel_1371 | 81.32 | 53.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_amel_1742 | 69.16 | 64.18 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_amel_1797 | 85.38 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_amel_1855 | 77.51 | 96.80 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSAMEG00000007786 retrocopies