Parental gene:

MTCH2, ENSBTAG00000018742

Aliases:None
Description:mitochondrial carrier homolog 2 [Source:RefSeq peptide;Acc:NP_788807]
Organism:Cow (Bos taurus)
Coordinates:15:78613665..78633634(-)


>ENSBTAG00000018742
ATGGCGGACGCGGCCAGTCAGGTGCTCCTGGGCTCCGGTCTCACCATCCTGTCCCAGCCGCTCATGTACGTGAAGGTGCT
CATCCAGGTGGGATATGAGCCTCTTGCTCCAACAGTAGGACGAAATATTTTTGGGCGGCAAGTCTGTCAACTTCCTGGTC
TCTTTTGTTATGCTCAGCACATCGCGAGCATTGATGGGAAGCGTGGATTGTTCACAGGCTTAACTCCAAGACTGTGTTCA
GGCGTCCTTGGAACTGTGGTCCATGGTAAAGTTCTACAGCATTACCAGGAGTGTGACAAGGCTGAGGAGTCAGGATCTGG
AAATGTACAGAAAGAAGTCTCATCTTCCTTTGACCGGGTTATCAAAGAGACAACTCGGGAGATGATGGCTCGTTCTGCTG
CTACCCTCATCACACATCCCTTCCACGTGATCACTCTGAGATCTATGGTACAATTCATTGGCAGAGAATCCAAGTACTGT
GGACTTTGTGACTCCATAGCAACAATCTATCGGGAAGAGGGCATCCTAGGATTTTTTGCGGGCCTTATCCCTCGCCTGCT
CGGTGACATCATCTCCTTGTGGCTTTGTAACTCGCTGGCCTACCTCGTCAATACCTACGCTCTGGATAGTGGGGTTTCCA
CCATGAATGAAATGAAGAGCTATTCCCAAGCTGTCACAGGATTTTTTGCCAGTATGTTGACCTATCCCTTTGTGCTTGTC
TCTAATCTTATGGCTGTCAACAACTGTGGGCTTGCTGGTGGATGCCCTCCCTATGCCCCAGTATATTCTTCTTGGATAGA
TTGCTGGTGCATGCTACAGAAAGAGGGAAATATGAGCCGAGGAAATAGCTTGTTTTTCCGGAAGGTCCCCTTTGGGAAGA
CCTACTGTTGTGACCTGAGAATGTTGATTTGA

Library Parental gene expression (RPM)
SRP017611_brain 45 .77 RPM
SRP017611_kidney 142 .31 RPM
SRP017611_liver 118 .62 RPM
ERP005899_muscle 189 .67 RPM
ERP005899_liver 159 .48 RPM
SRP030211_testis 212 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008473 ortholog_one2one 1 retrogene
retro_chof_2162,
Callithrix jacchus ENSCJAG00000020213 ortholog_one2one 3 retrogenes
retro_cjac_1551, retro_cjac_2003, retro_cjac_3812,
Dasypus novemcinctus ENSDNOG00000001221 ortholog_one2one 1 retrogene
retro_dnov_1867,
Homo sapiens ENSG00000109919 ortholog_one2one 2 retrogenes
retro_hsap_1041, retro_hsap_1690,
Gorilla gorilla ENSGGOG00000008281 ortholog_one2one 3 retrogenes
retro_ggor_1267, retro_ggor_3083, retro_ggor_822,
Mustela putorius furo ENSMPUG00000003852 ortholog_one2one 1 retrogene
retro_mputfur_312,
Mus musculus ENSMUSG00000027282 ortholog_one2one 1 retrogene
retro_mmus_2657,
Nomascus leucogenys ENSNLEG00000014704 ortholog_one2one 2 retrogenes
retro_nleu_1335, retro_nleu_913,
Oryctolagus cuniculus ENSOCUG00000006368 ortholog_one2one 2 retrogenes
retro_ocun_1197, retro_ocun_983,
Otolemur garnettii ENSOGAG00000011607 ortholog_one2one 1 retrogene
retro_ogar_2578,
Pongo abelii ENSPPYG00000003296 ortholog_one2one 3 retrogenes
retro_pabe_1392, retro_pabe_1894, retro_pabe_872,
Pan troglodytes ENSPTRG00000003573 ortholog_one2one 2 retrogenes
retro_ptro_1144, retro_ptro_710,
Pteropus vampyrus ENSPVAG00000007348 ortholog_one2one 1 retrogene
retro_pvam_954,
Sorex araneus ENSSARG00000001399 ortholog_one2one 1 retrogene
retro_sara_705,
Sus scrofa ENSSSCG00000013232 ortholog_one2one 3 retrogenes
retro_sscr_262, retro_sscr_279, retro_sscr_602,
Tursiops truncatus ENSTTRG00000014169 ortholog_one2one 2 retrogenes
retro_ttru_1476, retro_ttru_353,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1321 66.67 56.44
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Download FASTA sequences of all ENSBTAG00000018742 retrocopies