Parental gene:

MTCH2, ENSDNOG00000001221

Aliases:None
Description:mitochondrial carrier 2 [Source:HGNC Symbol;Acc:17587]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1770:41799..62550(-)


>ENSDNOG00000001221
ATGGCGGACGCGGCCAGTCAGGTGCTCCTGGGCTCCGGTCTCACCATCCTGTCCCAGCCGCTCATGTACGTGAAGGTGCT
CATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCAGCACGCCAGCATTGATGCATGTGGGTTGTTCACAGACTTAGTTCCAAGACTGTGTTCAGGAGCCCTC
GGAACTGTGGTCCATGGTAAAGTTTTACAGCATTACCAGGAATGTGAAAAGGTTGAGGAATTAGGAACTGGGAATGTACA
GAAAGAAGTGTCATCATCCTTTGACCGAGTTATCAAGGAGACAACTCGAGAGATGATGGCTCGTTCTGCTGCTACCCTCA
TCACACATCCCTTTCATGTGATCACTTTAAGATCTATGGTTCAATTCATTGGCAGAGAATCCAAATATTGTGGACTTTGT
GAATCCATAGTAACCATCTATAGGGAAGAAGGCATCCTAGGATTTTTTGCGGGTCTTATTCCTCGCCTCCTAGGTGACAT
CATTTCTTTGTGGCTCTGTAACTCACTGGCCTACCTCGTCAATACCTATGCACTGGACAGTGGGGTTTCTACCATGAATG
AAATGAAGAGTTATTCCCAAGCTGTCACAGGATTTTTTGCCAGTATGTTGACCTATCCCTTTGTGCTTGTCTCTAATCTC
ATGGCTGTCAACAACTGTGGGCTTGCTGGTGGATCTCCTCCTTACTCCCCAATATATACTTCTTGGATAGATTGTTGGTG
CATGCTACAAAAAGAGGGAAATATGAGCCGAGGAAATAGCTTGTTTTTCCGGAAAGTTCCCTTTGGGAAGACTTATTGTT
GTGACCTGAGAATGTTAATTTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 162 .38 RPM
SRP012922_cerebellum 55 .26 RPM
SRP012922_heart 61 .72 RPM
SRP012922_kidney 114 .99 RPM
SRP012922_liver 123 .23 RPM
SRP012922_lung 30 .70 RPM
SRP012922_quadricep_muscle 75 .29 RPM
SRP012922_spleen 35 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018742 ortholog_one2one 1 retrogene
retro_btau_1321,
Choloepus hoffmanni ENSCHOG00000008473 ortholog_one2one 1 retrogene
retro_chof_2162,
Callithrix jacchus ENSCJAG00000020213 ortholog_one2one 3 retrogenes
retro_cjac_1551, retro_cjac_2003, retro_cjac_3812,
Homo sapiens ENSG00000109919 ortholog_one2one 2 retrogenes
retro_hsap_1041, retro_hsap_1690,
Gorilla gorilla ENSGGOG00000008281 ortholog_one2one 3 retrogenes
retro_ggor_1267, retro_ggor_3083, retro_ggor_822,
Mustela putorius furo ENSMPUG00000003852 ortholog_one2one 1 retrogene
retro_mputfur_312,
Mus musculus ENSMUSG00000027282 ortholog_one2one 1 retrogene
retro_mmus_2657,
Nomascus leucogenys ENSNLEG00000014704 ortholog_one2one 2 retrogenes
retro_nleu_1335, retro_nleu_913,
Oryctolagus cuniculus ENSOCUG00000006368 ortholog_one2one 2 retrogenes
retro_ocun_1197, retro_ocun_983,
Otolemur garnettii ENSOGAG00000011607 ortholog_one2one 1 retrogene
retro_ogar_2578,
Pongo abelii ENSPPYG00000003296 ortholog_one2one 3 retrogenes
retro_pabe_1392, retro_pabe_1894, retro_pabe_872,
Pan troglodytes ENSPTRG00000003573 ortholog_one2one 2 retrogenes
retro_ptro_1144, retro_ptro_710,
Pteropus vampyrus ENSPVAG00000007348 ortholog_one2one 1 retrogene
retro_pvam_954,
Sorex araneus ENSSARG00000001399 ortholog_one2one 1 retrogene
retro_sara_705,
Sus scrofa ENSSSCG00000013232 ortholog_one2one 3 retrogenes
retro_sscr_262, retro_sscr_279, retro_sscr_602,
Tursiops truncatus ENSTTRG00000014169 ortholog_one2one 2 retrogenes
retro_ttru_1476, retro_ttru_353,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1867 94.39 70.67
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000001221 retrocopies