Parental gene: | MTCH2, ENSPPYG00000003296 |
| Aliases: | None |
| Description: | Mitochondrial carrier homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5R5M0] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 11:20964627..20993616(+) |
>ENSPPYG00000003296
ATGCGCCTCTGTCTCTTAAGCCCCGCCCCGACCGCAGCGCCCCCTCGCGAGCGCCTGCCGTTTCTCGGGGCGGGACGGTG
GGGCGGGGACTGGGCGGAGAGGCGCGCGCTGGTGCGTGCGTGCGCGCGCGCCGCGGGCGGGCCAGTGAAACCGGCGGCCC
TGGCACGTGACCTAGGACCGGCTCACCGGGTCGCTTGGTGGCTCTGTCTGTCTGTCCGTCCGTCCGCGGGTGCCATCATG
GCGGACGCGGCCAGTCAGGTGCTCCTGGGCTCCGGTCTCACCATCCTGTCCCAGCCGCTCATGTACGTGAAAGTGCTCAT
CCAGGTGGGATATGAGCCTCTTCCTCCAACAATAGGACGAAATATTTTTGGGCGGCAAGTGTGTCAGCTTCCTGGTCTCT
TTAGTTATGCTCAGCACATTGCCAGTATCGATGGGAGGCGTGGGTTGTTCACAGGCTTAACTCCAAGACTGTGTTCGGGA
GTCCTTGGAACTGTGGTCCATGGTAAAGTTTTACAGCATTACCAGGAGAGTGACAAGGGTGAGGAGTTAGGACCTGGAAA
TGTACAGAAAGAAGTCTCATCTTCCTTTGACCACGTTATCAAGGAGACAACTCGAGAGATGATCGCTCGTTCTGCTGCTA
CCCTCATCACACATCCCTTCCATGTGATCACTCTGAGATCTATGGTACAGTTCATTGGCAGAGAATCCAAGTACTGTGGA
CTATGTGATTCCATAATAACCATCTATCGGGAAGAGGGCATTCTAGGATTTTTCGCGGGTCTTGTTCCTCGCCTTCTAGG
TGACATCCTTTCTTTGTGGCTGTGTAACTCACTGGCCTACCTCGTCAATACCTATGCACTGGACAGTGGGGTTTCTACCA
TGAATGAAATGAAGAGTTATTCTCAAGCTGTCACAGGATTTTTTGCGAGTATGTTGACCTATCCCTTTGTGCTTGTCTCC
AATCTTATGGCTGTCAACAACTGTGGTCTTGCTGGTGGATGCCCTCCTTACTCCCCAATATATACGTCTTGGATAGATTG
TTGGTGCATGCTACAAAAAGAGGGGAATATGAGCCGAGGAAATAGCTTGTTTTTCCGGAAGGTCCCCTTTGGGAAGACTT
ATTGTTGTGACCTGAAAATGTTAATTTGA
ATGCGCCTCTGTCTCTTAAGCCCCGCCCCGACCGCAGCGCCCCCTCGCGAGCGCCTGCCGTTTCTCGGGGCGGGACGGTG
GGGCGGGGACTGGGCGGAGAGGCGCGCGCTGGTGCGTGCGTGCGCGCGCGCCGCGGGCGGGCCAGTGAAACCGGCGGCCC
TGGCACGTGACCTAGGACCGGCTCACCGGGTCGCTTGGTGGCTCTGTCTGTCTGTCCGTCCGTCCGCGGGTGCCATCATG
GCGGACGCGGCCAGTCAGGTGCTCCTGGGCTCCGGTCTCACCATCCTGTCCCAGCCGCTCATGTACGTGAAAGTGCTCAT
CCAGGTGGGATATGAGCCTCTTCCTCCAACAATAGGACGAAATATTTTTGGGCGGCAAGTGTGTCAGCTTCCTGGTCTCT
TTAGTTATGCTCAGCACATTGCCAGTATCGATGGGAGGCGTGGGTTGTTCACAGGCTTAACTCCAAGACTGTGTTCGGGA
GTCCTTGGAACTGTGGTCCATGGTAAAGTTTTACAGCATTACCAGGAGAGTGACAAGGGTGAGGAGTTAGGACCTGGAAA
TGTACAGAAAGAAGTCTCATCTTCCTTTGACCACGTTATCAAGGAGACAACTCGAGAGATGATCGCTCGTTCTGCTGCTA
CCCTCATCACACATCCCTTCCATGTGATCACTCTGAGATCTATGGTACAGTTCATTGGCAGAGAATCCAAGTACTGTGGA
CTATGTGATTCCATAATAACCATCTATCGGGAAGAGGGCATTCTAGGATTTTTCGCGGGTCTTGTTCCTCGCCTTCTAGG
TGACATCCTTTCTTTGTGGCTGTGTAACTCACTGGCCTACCTCGTCAATACCTATGCACTGGACAGTGGGGTTTCTACCA
TGAATGAAATGAAGAGTTATTCTCAAGCTGTCACAGGATTTTTTGCGAGTATGTTGACCTATCCCTTTGTGCTTGTCTCC
AATCTTATGGCTGTCAACAACTGTGGTCTTGCTGGTGGATGCCCTCCTTACTCCCCAATATATACGTCTTGGATAGATTG
TTGGTGCATGCTACAAAAAGAGGGGAATATGAGCCGAGGAAATAGCTTGTTTTTCCGGAAGGTCCCCTTTGGGAAGACTT
ATTGTTGTGACCTGAAAATGTTAATTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 29 .97 RPM |
| SRP007412_cerebellum | 26 .02 RPM |
| SRP007412_heart | 24 .99 RPM |
| SRP007412_kidney | 66 .46 RPM |
| SRP007412_liver | 73 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000018742 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008473 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020213 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000001221 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000109919 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008281 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003852 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027282 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014704 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006368 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011607 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016557 | within_species_paralog | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000003573 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000007348 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000001399 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000013232 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000014169 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_872 | 78.50 | 51.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1392 | 67.98 | 59.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1894 | 72.45 | 75.65 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000003296 retrocopies