Parental gene: | MTCH2, ENSOCUG00000006368 |
| Aliases: | None |
| Description: | mitochondrial carrier 2 [Source:HGNC Symbol;Acc:17587] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 1:186926058..186947218(-) |
>ENSOCUG00000006368
CGCTTCGCGGGCGGGCCAGTGAAGCCGGCGTCCGCACGTGACCTGGGGCCGGCTCGGTCGCTTGGTGGCTCGTTCTGTCT
GTCCGTCCGCGGGTGCCATCATGGCGGACGCGGCCAGTCAGGTGCTCCTGGGCTCCGGTCTCACCATCCTGTCCCAGCCG
CTCATGTACGTGAAAGTGCTCATCCAGCTCAGCACATTGCCAGCATCGACGGGAGGCGTGGGTTGTTCACAGGCTTAACT
CCAAGACTGTGTTCAGGAGTCCTTGGAACTGTGGTCCATGGAAAAGTTTTACAGGTAAGAAAATTAATCCACAGATTCAA
GGACTTGGGACCTGGAAATGCACAGAAAGATGTCTCATCTTCCTTTGACCGAGTTATCAAAGAGACAACTCGAGAGATGA
TCGCTCGATCTGCTGCTACCCTCATCACACATCCCTTCCACGTGATCACACTGAGATCTATGGTACAATTCATTGGCAGA
GAATCCAAGTACTGTGGACTTTATGACTCCATAGTAACCATCTATCGGGAAGAAGGCATCCTGGGATTTTTTGCGGGTCT
TATTCCTCGCCTCCTGGGTGACATAATTTCTTTGTGGCTCTGTAACTCGCTGGCGTACCTTGTCAATACCTATGCACTGG
ACAGTGGGGTGTCTACCATGAATGAAATGAAGAGTTACTCCCAAGCTGTCACAGGATTTTTTGCCAGTATGTTGACCTAC
CCCTTTGTGCTTGTGTCTAATCTTATGGCTGTCAACAACTGTGGGCTTGCTGGTGGATGCCCTCCTTACTCCCCAATATA
TACTTCTTGGATAGATTGCTGGTGCATGCTACAAAAAGAGGGAAACATGAGCCGAGGAAATAGCTTGTTTTTCCGGAAGG
TCCCCTTTGGGAAGACTTACTGTTGTGACCTGAAAATGTTAATGTGA
CGCTTCGCGGGCGGGCCAGTGAAGCCGGCGTCCGCACGTGACCTGGGGCCGGCTCGGTCGCTTGGTGGCTCGTTCTGTCT
GTCCGTCCGCGGGTGCCATCATGGCGGACGCGGCCAGTCAGGTGCTCCTGGGCTCCGGTCTCACCATCCTGTCCCAGCCG
CTCATGTACGTGAAAGTGCTCATCCAGCTCAGCACATTGCCAGCATCGACGGGAGGCGTGGGTTGTTCACAGGCTTAACT
CCAAGACTGTGTTCAGGAGTCCTTGGAACTGTGGTCCATGGAAAAGTTTTACAGGTAAGAAAATTAATCCACAGATTCAA
GGACTTGGGACCTGGAAATGCACAGAAAGATGTCTCATCTTCCTTTGACCGAGTTATCAAAGAGACAACTCGAGAGATGA
TCGCTCGATCTGCTGCTACCCTCATCACACATCCCTTCCACGTGATCACACTGAGATCTATGGTACAATTCATTGGCAGA
GAATCCAAGTACTGTGGACTTTATGACTCCATAGTAACCATCTATCGGGAAGAAGGCATCCTGGGATTTTTTGCGGGTCT
TATTCCTCGCCTCCTGGGTGACATAATTTCTTTGTGGCTCTGTAACTCGCTGGCGTACCTTGTCAATACCTATGCACTGG
ACAGTGGGGTGTCTACCATGAATGAAATGAAGAGTTACTCCCAAGCTGTCACAGGATTTTTTGCCAGTATGTTGACCTAC
CCCTTTGTGCTTGTGTCTAATCTTATGGCTGTCAACAACTGTGGGCTTGCTGGTGGATGCCCTCCTTACTCCCCAATATA
TACTTCTTGGATAGATTGCTGGTGCATGCTACAAAAAGAGGGAAACATGAGCCGAGGAAATAGCTTGTTTTTCCGGAAGG
TCCCCTTTGGGAAGACTTACTGTTGTGACCTGAAAATGTTAATGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 81 .55 RPM |
| SRP017611_kidney | 137 .74 RPM |
| SRP017611_brain | 116 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000018742 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008473 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020213 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000001221 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000109919 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008281 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003852 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027282 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014704 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011607 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003296 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000003573 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000007348 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000001399 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000013232 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000014169 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_983 | 76.92 | 86.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1197 | 76.58 | 86.60 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000006368 retrocopies