Parental gene: | DCAF13, ENSCAFG00000000663 |
| Aliases: | DCAF13, WDSOF1 |
| Description: | DDB1 and CUL4 associated factor 13 [Source:HGNC Symbol;Acc:24535] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 13:4835340..4860159(+) |
>ENSCAFG00000000663
ATGAAGGTGAAGATGCTGAGCCGGAACCCGGACAACTATGTCCGCGAAACCAAGCTGGACTTACAACGAGTTCCAAGAAA
CTATGATCCTACCTTACATCCTTTTGAGGTCCCACGAGAGTATGTAAGAGCTTTAAATGCTACCAAACTGGAACGGGTAT
TTGCAAAACCATTTCTTGCTTCCCTGGATGGTCACCGAGATGGAGTCAATTGCTTGGCAAAGCATCCAAAGAGCCTGGCT
ACTGTCCTTTCTGGGGCATGTGATGGAGAGGTTAGAATTTGGAATTTGACTAAACGAAAATGTATCCGCACAATACAAGC
ACATGAAGGTTTTGTACGAGGAATATGTACTCGATTTTGTGGGACTTCTTTTTTTACTGTTGGTGATGACAAAACTGTGA
AGCAGTGGAAAATGGATGGACCAGGCTATGGAGAAGAGGAGGAACCATTGCATACAATACTAGGAAAGACAGTGTATACA
GGAATTGATCATCACTGGAAAGAAGCTGTTTTTGCCACATGTGGACAGCAAGTAGACATTTGGGATGAGCAAAGAACAAG
TCCTATATGTTCAATGACCTGGGGATTCGACAGTATAAGTAGTGTTAAATTTAATCCAATTGAGACATTTCTCTTGGGAA
GTTGTGCTTCTGACAGAAATATAGTACTATATGATATGAGGCAAGCTACTCCCCTGAAAAAGGTCATCTTAGATATGAGA
ACAAATACAATATGTTGGAACCCTATGGAAGCTTTCATTTTTACTGCAGCAAATGAAGATTACAACTTATATACTTTTGA
TATGCGTGCACTGGATACTCCCGTAATGGTACATATGGATCATGTATCTGCGGTGCTTGATGTGGATTATTCTCCCACTG
GGAAAGAGTTTGTGTCAGCTAGTTTTGATAAATCTATTCGTATCTTTCCTGTGGACAAAAGTAGAAGCAGGGAGGTCTAT
CACACAAAGAGAATGCAACATGTTATCTGTGTGAAATGGACTTCTGACAGCAAATATATTATGTGTGGATCTGATGAAAT
GAACATTCGTCTATGGAAAGCTAATGCTTCTGAAAAATTGGGTGTGCTTACATCACGAGAAAAAGCAGCCAAAGATTATA
ACCAGAAGTTGAAGGAGAAATTTCAACATCATCCTCACATAAAACGCATTGCTCGTCACCGGCACCTACCAAAATCCATC
TACAGCCAGATCCAGGAACAGCGCATCATGAAGGAAGCTCGCCGACGAAAGGAGGTGAATCGTCTCAAACACAGCAAGCC
CGGATCTGTGTCGATTGTCCCAGAGAAGAAGAAACACATAGTGGCAGTTGTGAAATAA
ATGAAGGTGAAGATGCTGAGCCGGAACCCGGACAACTATGTCCGCGAAACCAAGCTGGACTTACAACGAGTTCCAAGAAA
CTATGATCCTACCTTACATCCTTTTGAGGTCCCACGAGAGTATGTAAGAGCTTTAAATGCTACCAAACTGGAACGGGTAT
TTGCAAAACCATTTCTTGCTTCCCTGGATGGTCACCGAGATGGAGTCAATTGCTTGGCAAAGCATCCAAAGAGCCTGGCT
ACTGTCCTTTCTGGGGCATGTGATGGAGAGGTTAGAATTTGGAATTTGACTAAACGAAAATGTATCCGCACAATACAAGC
ACATGAAGGTTTTGTACGAGGAATATGTACTCGATTTTGTGGGACTTCTTTTTTTACTGTTGGTGATGACAAAACTGTGA
AGCAGTGGAAAATGGATGGACCAGGCTATGGAGAAGAGGAGGAACCATTGCATACAATACTAGGAAAGACAGTGTATACA
GGAATTGATCATCACTGGAAAGAAGCTGTTTTTGCCACATGTGGACAGCAAGTAGACATTTGGGATGAGCAAAGAACAAG
TCCTATATGTTCAATGACCTGGGGATTCGACAGTATAAGTAGTGTTAAATTTAATCCAATTGAGACATTTCTCTTGGGAA
GTTGTGCTTCTGACAGAAATATAGTACTATATGATATGAGGCAAGCTACTCCCCTGAAAAAGGTCATCTTAGATATGAGA
ACAAATACAATATGTTGGAACCCTATGGAAGCTTTCATTTTTACTGCAGCAAATGAAGATTACAACTTATATACTTTTGA
TATGCGTGCACTGGATACTCCCGTAATGGTACATATGGATCATGTATCTGCGGTGCTTGATGTGGATTATTCTCCCACTG
GGAAAGAGTTTGTGTCAGCTAGTTTTGATAAATCTATTCGTATCTTTCCTGTGGACAAAAGTAGAAGCAGGGAGGTCTAT
CACACAAAGAGAATGCAACATGTTATCTGTGTGAAATGGACTTCTGACAGCAAATATATTATGTGTGGATCTGATGAAAT
GAACATTCGTCTATGGAAAGCTAATGCTTCTGAAAAATTGGGTGTGCTTACATCACGAGAAAAAGCAGCCAAAGATTATA
ACCAGAAGTTGAAGGAGAAATTTCAACATCATCCTCACATAAAACGCATTGCTCGTCACCGGCACCTACCAAAATCCATC
TACAGCCAGATCCAGGAACAGCGCATCATGAAGGAAGCTCGCCGACGAAAGGAGGTGAATCGTCTCAAACACAGCAAGCC
CGGATCTGTGTCGATTGTCCCAGAGAAGAAGAAACACATAGTGGCAGTTGTGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 9 .13 RPM |
| SRP017611_kidney | 24 .90 RPM |
| SRP017611_liver | 6 .24 RPM |
| SRP012049_cerebellum | 13 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001595 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016181 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000027256 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000164934 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015124 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007375 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003791 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002277 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018809 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000020493 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000006588 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_305 | 96.85 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1309 | 74.17 | 93.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_1533 | 74.71 | 56.85 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000000663 retrocopies