Parental gene:

TADA1, ENSCAFG00000015607

Aliases:None
Description:transcriptional adaptor 1 [Source:HGNC Symbol;Acc:30631]
Organism:Dog (Canis familiaris)
Coordinates:7:31513514..31528843(+)


>ENSCAFG00000015607
ATGGCGACCTTTGTGAGCGAGCTGGAAGCGGCCAAGAAGAACTTGAGCGAGGCCCTGGGGGACAACGTGAAACAATACTG
GGCTAATTTAAAGTTGTGGTTCAAGCAGAAGATCAGCAAAGAAGAGTTTGACCTTGAAGCCCATAGACTTCTCACGCAGG
ATAATGTCCATTCTCACAACGATTTCCTCCTGGCTATTCTTACGCGTTGTCAGATTTTGGTGTCTACACCAGAGGGTGCT
GGATCTTTGCACTGGACCGGGGGTTCTGCAGCTAAACCTGGAAAACCAAAGGGAAAGAAAAAACTTTCTTCTGTTCGTCA
GAAATTTGATCATAGATTCCAGCCTCAAAATCCCCTCTCGGGAGCCCAGCAGTTTGTGGCAAAGGATCCCCAAGATGATG
ATGACTTGAAACTTTGTTCCCACACAATGATGCTTCCCACTCGGGGTCAGCTGGAAGGGAGAATGATAGTGACTGCTTAT
GAGCACGGGTTGGACAACGTCACCGAGGAGGCAGTCTCAGCTGTTGTCTATGCGGTGGAGAATCACCTTAAAGATATATT
GACATCAGTTGTGTCAAGAAGGAAAGCTTATCGGTTACGTGATGGTCACTTTAAGTATGCCTTTGGTAGTAATGTAACCC
CACAGCCATACCTGAAGAATAGTGTAGTAGCTTACAACAACTTAATAGAAAGCCCTCCAGCCTTCTCTGCTCCTTGTGCT
GGTCAGAATCCAGCTTCCCACCCGCCCCCTGATGACGCGGAGCAGCAAGCTGCACTCCTCCTGGCATGCTCTGGGGATAC
CCTCCCTGCGTCTTTGCCTCCGGTCAACATGTACGACCTTTTTGAAGCTTTGCAGGTACACAGGGAAGTCATTCCTACAC
ATACTGTATACGCTCTCAACATTGAAAGGATCATCATGAAACTCTGGCATCCAAATCATGAAGAACTGCAGCAAGACAAA
GTCCACCGCCAGCGCCTGGCAGCCAAGGAAGGGCTTTTGCTCTGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 15 .32 RPM
SRP017611_kidney 10 .43 RPM
SRP017611_liver 5 .15 RPM
SRP012049_cerebellum 16 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012658 ortholog_one2one 1 retrogene
retro_chof_602,
Cavia porcellus ENSCPOG00000025598 ortholog_one2one 1 retrogene
retro_cpor_1225,
Dasypus novemcinctus ENSDNOG00000018606 ortholog_one2one 1 retrogene
retro_dnov_1293,
Homo sapiens ENSG00000152382 ortholog_one2one 1 retrogene
retro_hsap_3928,
Gorilla gorilla ENSGGOG00000008168 ortholog_one2one 1 retrogene
retro_ggor_2644,
Mus musculus ENSMUSG00000026563 ortholog_one2one 1 retrogene
retro_mmus_865,
Otolemur garnettii ENSOGAG00000007621 ortholog_one2one 1 retrogene
retro_ogar_1989,
Pongo abelii ENSPPYG00000000557 ortholog_one2one 1 retrogene
retro_pabe_3243,
Pan troglodytes ENSPTRG00000001627 ortholog_one2one 1 retrogene
retro_ptro_2671,
Tupaia belangeri ENSTBEG00000007283 ortholog_one2one 1 retrogene
retro_tbel_3501,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_849 85.50 99.70
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Download FASTA sequences of all ENSCAFG00000015607 retrocopies