Parental gene: | RBM22, ENSCAFG00000018082 |
| Aliases: | None |
| Description: | RNA binding motif protein 22 [Source:HGNC Symbol;Acc:25503] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 4:58460908..58469423(+) |
>ENSCAFG00000018082
ATGGCGACCTCTCTGGGTTCCAACACCTACAACAGGCAGAACTGGGAGGATGCGGACTTCCCCATTCTGTGCCAGACGTG
TCTAGGAGAAAACCCATATATCCGAATGACCAAAGAAAAGTATGGGAAAGAATGTAAAATCTGTGCCAGGCCATTCACAG
TGTTTCGCTGGTGCCCCGGGGTCCGCATGCGTTTCAAGAAAACTGAAGTGTGCCAAACCTGTAGTAAATTGAAGAATGTC
TGTCAGACCTGCCTTTTGGACCTTGAGTACGGACTAGGCCTGCCCATCCAGGTTCGTGATGCAGGATTGTCTTTTAAGGA
TGACATGCCAAAGTCAGATGTCAACAAAGAGTACTACACACAGAATATGGAGAGAGAAATTTCTAACTCTGATGGAACGC
GACCAGTTGGCATGTTGGGGAAAGCTACATCCACCAGTGACATGCTGCTCAAGCTGGCCCGGACCACACCCTACTACAAG
AGGAATCGACCCCACATTTGCTCCTTCTGGGTAAAAGGAGAATGTAAGAGAGGAGAGGAATGTCCATACAGACATGAAAA
ACCAACAGATCCAGATGACCCCCTTGCTGATCAGAACATTAAAGACCGATATTATGGTATCAATGACCCTGTGGCAGATA
AGCTTCTAAAGCGAGCTTCCACAATGCCTCGTCTGGACCCGCCAGAGGACAAGACTATCACCACACTATATGTTGGTGGT
CTGGGCGATACTATTACTGAGACCGATCTAAGAAATCACTTCTACCAGTTTGGAGAAATCCGGACGATCACTGTTGTGCA
AAGACAGCAGTGTGCGTTCATCCAGTTTGCCACGAGGCAGGCTGCAGAGGTGGCTGCGGAGAAGTCCTTTAATAAGTTGA
TTGTCAATGGCCGTAGACTCAACGTGAAATGGGGAAGGTCCCAAGCAGCCAGAGGAAAAGAAAAAGAGAAGGATGGGACC
ACAGACTCTGGGATCAAGCTAGAGCCCGTTCCGGGACTGCCAGGAGCTCTTCCTCCTCCTCCTGCAGCAGAAGAAGAAGC
CTCTGCCAACTACTTCAACCTGCCCCCGAGTGGTCCTCCAGCTGTGGTGAACATTGCACTGCCACCTCCCCCTGGTATTG
CCCCACCCCCACCCCCAGGTTTTGGGCCACACATGTTCCACCCAATGGGACCACCCCCTCCTTTCATGAGGGCTCCAGGA
CCAATCCACTATCCTTCTCAGGACCCTCAGAGGATGGGAGCTCATGCTGGGAAACACAGCAGTCCCTAG
ATGGCGACCTCTCTGGGTTCCAACACCTACAACAGGCAGAACTGGGAGGATGCGGACTTCCCCATTCTGTGCCAGACGTG
TCTAGGAGAAAACCCATATATCCGAATGACCAAAGAAAAGTATGGGAAAGAATGTAAAATCTGTGCCAGGCCATTCACAG
TGTTTCGCTGGTGCCCCGGGGTCCGCATGCGTTTCAAGAAAACTGAAGTGTGCCAAACCTGTAGTAAATTGAAGAATGTC
TGTCAGACCTGCCTTTTGGACCTTGAGTACGGACTAGGCCTGCCCATCCAGGTTCGTGATGCAGGATTGTCTTTTAAGGA
TGACATGCCAAAGTCAGATGTCAACAAAGAGTACTACACACAGAATATGGAGAGAGAAATTTCTAACTCTGATGGAACGC
GACCAGTTGGCATGTTGGGGAAAGCTACATCCACCAGTGACATGCTGCTCAAGCTGGCCCGGACCACACCCTACTACAAG
AGGAATCGACCCCACATTTGCTCCTTCTGGGTAAAAGGAGAATGTAAGAGAGGAGAGGAATGTCCATACAGACATGAAAA
ACCAACAGATCCAGATGACCCCCTTGCTGATCAGAACATTAAAGACCGATATTATGGTATCAATGACCCTGTGGCAGATA
AGCTTCTAAAGCGAGCTTCCACAATGCCTCGTCTGGACCCGCCAGAGGACAAGACTATCACCACACTATATGTTGGTGGT
CTGGGCGATACTATTACTGAGACCGATCTAAGAAATCACTTCTACCAGTTTGGAGAAATCCGGACGATCACTGTTGTGCA
AAGACAGCAGTGTGCGTTCATCCAGTTTGCCACGAGGCAGGCTGCAGAGGTGGCTGCGGAGAAGTCCTTTAATAAGTTGA
TTGTCAATGGCCGTAGACTCAACGTGAAATGGGGAAGGTCCCAAGCAGCCAGAGGAAAAGAAAAAGAGAAGGATGGGACC
ACAGACTCTGGGATCAAGCTAGAGCCCGTTCCGGGACTGCCAGGAGCTCTTCCTCCTCCTCCTGCAGCAGAAGAAGAAGC
CTCTGCCAACTACTTCAACCTGCCCCCGAGTGGTCCTCCAGCTGTGGTGAACATTGCACTGCCACCTCCCCCTGGTATTG
CCCCACCCCCACCCCCAGGTTTTGGGCCACACATGTTCCACCCAATGGGACCACCCCCTCCTTTCATGAGGGCTCCAGGA
CCAATCCACTATCCTTCTCAGGACCCTCAGAGGATGGGAGCTCATGCTGGGAAACACAGCAGTCCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 11 .27 RPM |
| SRP017611_kidney | 12 .68 RPM |
| SRP017611_liver | 6 .89 RPM |
| SRP012049_cerebellum | 17 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020963 | ortholog_one2one | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000001946 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000011166 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000086589 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000012947 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000009040 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000020683 | ortholog_one2one | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000009574 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015955 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000017423 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000003939 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1480 | 97.63 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000018082 retrocopies