Parental gene:

RBM22, ENSG00000086589

Aliases:RBM22, Cwc2, ZC3H16, fSAP47
Description:RNA binding motif protein 22 [Source:HGNC Symbol;Acc:25503]
Organism:Human (Homo sapiens)
Coordinates:5:150070355..150080669(-)


>ENSG00000086589
ATGGCGACCTCTCTGGGTTCCAACACCTACAACAGGCAGAACTGGGAGGATGCGGACTTCCCCATTCTGTGCCAGACATG
TCTTGGAGAAAACCCATATATCCGAATGACCAAAGAAAAGTATGGGAAGGAATGCAAAATCTGTGCCAGGCCATTCACAG
TGTTTCGCTGGTGCCCTGGAGTCCGCATGCGTTTCAAGAAGACTGAAGTGTGCCAAACCTGCAGTAAATTGAAGAATGTC
TGTCAGACCTGCCTCTTAGACCTAGAGTATGGCCTGCCCATCCAGGTTCGTGACGCAGGATTGTCTTTTAAAGATGACAT
GCCAAAGTCAGATGTCAACAAAGAGTACTATACACAGAATATGGAGAGAGAGATTTCTAACTCTGATGGAACACGGCCAG
TTGGCATGCTGGGGAAAGCCACATCTACCAGTGACATGCTGCTCAAACTGGCCCGGACCACACCCTACTACAAAAGGAAT
CGACCCCACATTTGCTCCTTCTGGGTGAAAGGAGAGTGTAAGAGAGGAGAGGAATGTCCATACAGACATGAGAAGCCTAC
AGATCCAGATGACCCCCTTGCTGATCAGAATATTAAAGACCGTTATTACGGAATCAATGATCCTGTAGCTGACAAGCTTC
TAAAGCGGGCTTCAACAATGCCTCGGCTGGACCCACCAGAGGATAAAACTATCACCACACTATATGTTGGTGGTCTAGGT
GATACCATTACTGAGACAGATTTAAGAAATCATTTCTACCAGTTCGGAGAGATCCGGACGATCACTGTTGTGCAGAGACA
GCAGTGTGCTTTCATCCAGTTTGCCACACGGCAGGCTGCAGAAGTGGCTGCTGAGAAGTCCTTTAATAAGTTGATTGTAA
ATGGCCGCAGACTGAATGTGAAATGGGGAAGATCCCAGGCAGCCAGAGGAAAAGAAAAAGAGAAAGATGGAACTACAGAC
TCTGGGATCAAACTAGAACCTGTTCCAGGATTGCCAGGAGCTCTTCCTCCTCCTCCTGCAGCAGAAGAAGAAGCCTCTGC
CAACTACTTCAACTTGCCCCCAAGTGGTCCTCCAGCTGTGGTGAACATTGCTCTGCCACCGCCCCCTGGCATTGCTCCAC
CCCCACCCCCAGGTTTTGGGCCACACATGTTCCACCCAATGGGACCACCCCCTCCTTTCATGCGGGCTCCAGGACCAATC
CACTATCCTTCTCAGGACCCTCAGAGGATGGGAGCTCATGCTGGAAAACACAGCAGCCCCTAG

Library Parental gene expression (RPM)
bodymap2_adipose 37 .31 RPM
bodymap2_adrenal 42 .06 RPM
bodymap2_brain 34 .22 RPM
bodymap2_breast 35 .45 RPM
bodymap2_colon 38 .03 RPM
bodymap2_heart 23 .81 RPM
bodymap2_kidney 38 .24 RPM
bodymap2_liver 15 .00 RPM
bodymap2_lung 52 .25 RPM
bodymap2_lymph_node 47 .26 RPM
bodymap2_ovary 63 .96 RPM
bodymap2_prostate 48 .83 RPM
bodymap2_skeletal_muscle 49 .98 RPM
bodymap2_testis 44 .32 RPM
bodymap2_thyroid 39 .51 RPM
bodymap2_white_blood_cells 80 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018082 ortholog_one2one 1 retrogene
retro_cfam_1480,
Callithrix jacchus ENSCJAG00000020963 ortholog_one2one 6 retrogenes
retro_cjac_1338, retro_cjac_2471, retro_cjac_3342, retro_cjac_3390, retro_cjac_3934, retro_cjac_990,
Cavia porcellus ENSCPOG00000001946 ortholog_one2one 2 retrogenes
retro_cpor_280, retro_cpor_283,
Dasypus novemcinctus ENSDNOG00000011166 ortholog_one2one 1 retrogene
retro_dnov_2298,
Gorilla gorilla ENSGGOG00000012947 ortholog_one2one 2 retrogenes
retro_ggor_2337, retro_ggor_2859,
Myotis lucifugus ENSMLUG00000009040 possible_ortholog 2 retrogenes
retro_mluc_1453, retro_mluc_153,
Macaca mulatta ENSMMUG00000020683 ortholog_one2one 4 retrogenes
retro_mmul_1199, retro_mmul_1348, retro_mmul_1553, retro_mmul_1762,
Monodelphis domestica ENSMODG00000009574 possible_ortholog 1 retrogene
retro_mdom_186,
Pongo abelii ENSPPYG00000015955 ortholog_one2one 4 retrogenes
retro_pabe_1412, retro_pabe_1594, retro_pabe_2861, retro_pabe_3486,
Pan troglodytes ENSPTRG00000017423 ortholog_one2one 2 retrogenes
retro_ptro_2348, retro_ptro_2898,
Tarsius syrichta ENSTSYG00000003939 ortholog_one2one 3 retrogenes
retro_tsyr_1090, retro_tsyr_1187, retro_tsyr_1231,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3465 67.26 59.84
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2. retro_hsap_4273 71.37 68.19
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Download FASTA sequences of all ENSG00000086589 retrocopies