Parental gene: | CCT6A, ENSCHOG00000000654 |
| Aliases: | None |
| Description: | chaperonin containing TCP1, subunit 6A (zeta 1) [Source:HGNC Symbol;Acc:1620] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_44026:3257..12725(+) |
>ENSCHOG00000000654
ATGGCGGCGGTGAAGACTCTGAACAAGGCTGAGGTGGCCCGCGCCCAAGCGGCGCTGGCGGTCAACATTAGCGCGGCGCG
AGGGCTGCAGGACGTGCTGAGGACCAACCTGGGGCCGAAGGGCACCATGAAAATGCTTGTTTCTGGTGCTGGGGACATCA
AGCTTACTAAAGATGGCAATGTGCTGCTTCATGAAATGCAAATTCAACACCCAACAGCCTCCTTAATAGCAAAAGTAGCA
ACAGCCCAGGATGACATAACTGGTGATGGTACTACTTCCAATGTCCTAATTATTGGAGAGCTACTGAAGCAAGCAGATCT
CTATATTTCTGAAGGTCTTCATCCCAGAATAATAACAGAAGGATTTGAAGCTGCAAAGGAAAAGGCACTTGAGTTTTTGG
AACAAATCAAAGTAAGCAAAGAGATGGACAGAGAAACACTTACGGATGTGGCCAGAACATCTCTACGTACTAAAGTTCAT
GCTGAACTTGCTGATGTCTTAACAGAGGCTGTAGTGGACTCCATTTTGGCCATTAGAAAACAAGATGAACCTATTGACCT
TTTCATGGTTGAGATCATGGAGATGAAACATAAATCTGAAACTGACACATTAATCAGAGGGCTTGTTTTGGACCATGGGG
CACGACATCCTGATATGAAGAAGAGAGTAGAAGATGCATACATCCTCACATGCAATGTGTCATTAGAATATGAAAAAACA
GAAGTGAACTCTGGCTTTTTTTACAAGAGTGCAGAAGAGAGAGAAAAACTAGTAAAAGCTGAAAGAAAATTCATTGAAGA
CAGAGTTACAAAAATAATAGAACTGAAAAAGAAAGTCTGCGGTGATTCAGATAAAGGATTTGTTGTCATTAATCAAAAGG
GAATTGACCCCTTTTCCTTAGATGCTCTTGCAAAAGAAGGCATAGTAGCTCTGCGCAGAGCTAAAAGGAGAAATATGGAA
AGGCTGACTCTTGCTTGTGGTGGAGTAGCTCTAAATTCTTTGGATGACCTAAATCCTGACTGTTTGGGGCATGCAGGCCT
TGTCTATGAGTATACATTGGGAGAAGAGAAGTTCACCTTTATTGAGAAATGTAACAGTCCTCGTTCTGTCACTTTATTGG
TGAAAGGACCAAATAAGCACACACTCACTCAAATCAAAGATGCAATAAGAGATGGCCTGAGGGCTGTCAAAAATGCTATT
GATGATGGCTGTGTGGTTCCAGGTGCTGGTGCAGTGGAAGTGGCAATGGCAGAAGCTCTCGTTAAATATAAGCCAAGTAT
AAAGGGCAGGGCCCAACTTGGAGTCCAAGCATTTGCAGATGCATTGCTCATTATTCCCAAGGTTCTTGCTCAGAACTCTG
GTTTTGACCTTCAGGAAACACTAGTAAAAGTACAAGCAGAACATTCAGAATCACAACTTAGTGTGGACTTGAACACAGGT
GAGCCAATGGTAGCAGCAGAAGTAGGCATATGGGATAACTACTGTGTAAAGAAACAGCTTCTGCACTCC
ATGGCGGCGGTGAAGACTCTGAACAAGGCTGAGGTGGCCCGCGCCCAAGCGGCGCTGGCGGTCAACATTAGCGCGGCGCG
AGGGCTGCAGGACGTGCTGAGGACCAACCTGGGGCCGAAGGGCACCATGAAAATGCTTGTTTCTGGTGCTGGGGACATCA
AGCTTACTAAAGATGGCAATGTGCTGCTTCATGAAATGCAAATTCAACACCCAACAGCCTCCTTAATAGCAAAAGTAGCA
ACAGCCCAGGATGACATAACTGGTGATGGTACTACTTCCAATGTCCTAATTATTGGAGAGCTACTGAAGCAAGCAGATCT
CTATATTTCTGAAGGTCTTCATCCCAGAATAATAACAGAAGGATTTGAAGCTGCAAAGGAAAAGGCACTTGAGTTTTTGG
AACAAATCAAAGTAAGCAAAGAGATGGACAGAGAAACACTTACGGATGTGGCCAGAACATCTCTACGTACTAAAGTTCAT
GCTGAACTTGCTGATGTCTTAACAGAGGCTGTAGTGGACTCCATTTTGGCCATTAGAAAACAAGATGAACCTATTGACCT
TTTCATGGTTGAGATCATGGAGATGAAACATAAATCTGAAACTGACACATTAATCAGAGGGCTTGTTTTGGACCATGGGG
CACGACATCCTGATATGAAGAAGAGAGTAGAAGATGCATACATCCTCACATGCAATGTGTCATTAGAATATGAAAAAACA
GAAGTGAACTCTGGCTTTTTTTACAAGAGTGCAGAAGAGAGAGAAAAACTAGTAAAAGCTGAAAGAAAATTCATTGAAGA
CAGAGTTACAAAAATAATAGAACTGAAAAAGAAAGTCTGCGGTGATTCAGATAAAGGATTTGTTGTCATTAATCAAAAGG
GAATTGACCCCTTTTCCTTAGATGCTCTTGCAAAAGAAGGCATAGTAGCTCTGCGCAGAGCTAAAAGGAGAAATATGGAA
AGGCTGACTCTTGCTTGTGGTGGAGTAGCTCTAAATTCTTTGGATGACCTAAATCCTGACTGTTTGGGGCATGCAGGCCT
TGTCTATGAGTATACATTGGGAGAAGAGAAGTTCACCTTTATTGAGAAATGTAACAGTCCTCGTTCTGTCACTTTATTGG
TGAAAGGACCAAATAAGCACACACTCACTCAAATCAAAGATGCAATAAGAGATGGCCTGAGGGCTGTCAAAAATGCTATT
GATGATGGCTGTGTGGTTCCAGGTGCTGGTGCAGTGGAAGTGGCAATGGCAGAAGCTCTCGTTAAATATAAGCCAAGTAT
AAAGGGCAGGGCCCAACTTGGAGTCCAAGCATTTGCAGATGCATTGCTCATTATTCCCAAGGTTCTTGCTCAGAACTCTG
GTTTTGACCTTCAGGAAACACTAGTAAAAGTACAAGCAGAACATTCAGAATCACAACTTAGTGTGGACTTGAACACAGGT
GAGCCAATGGTAGCAGCAGAAGTAGGCATATGGGATAACTACTGTGTAAAGAAACAGCTTCTGCACTCC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016077 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000010149 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000021279 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000001249 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000027654 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000146731 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011439 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012791 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015272 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000006565 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015664 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017674 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000015532 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025820 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019206 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000001421 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000923 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000015158 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_150 | 84.47 | 70.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1183 | 91.45 | 53.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1193 | 82.58 | 99.60 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000000654 retrocopies