Parental gene: | VPS26A, ENSCHOG00000007324 |
| Aliases: | None |
| Description: | vacuolar protein sorting 26 homolog A (S. pombe) [Source:HGNC Symbol;Acc:12711] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_2790:3966..32104(+) |
>ENSCHOG00000007324
AGTTTTCTTGGAGGCTTTTTTGGTCCCATTTGTGAGATCGATGTTGTCCTTAATGATGGGGACACCAGGAAAATGGCAGA
AATGAAAACTGAAGATGGGAAAGTAGAAAAACACTATCTTTTCTATGATGGGGAATCTGTTTCAGGAAAGGTAAACCTAG
CCTTTAAGCAACCTGGAAAGAGGCTAGAGCACCAAGGAATTAGAATTGAATTTGTAGGTCAAATTGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATTCAAGATTGTCTAC
ACATACAATTTGAATATAATAAATCAAAGTACCATTTAAAGGATGTGATTGTTGGAAAAATTTACTTCTTATTAGTAAGA
ATAAAAATCCAACATATGGAGTTACAACTGATCAAAAAAGAGATCACAGGAATTGGACCCAGTACTACGACAGAAACAGA
AACAATTGCCAAATATGAAATAATGGATGGTGCACCAGTAAAAGGTGAATCAATTCCCATAAGACTATTTTTAGCAGGGT
ATGACCCAACTCCAACAATGAGAGATGTGAACAAAAAATTTTCAGTAAGGTACTTTTTGAATCTAGTCCTTGTTGATGAA
GAAGACAGAAGGTACTTCAAGCAGCAGGAGATCATTTTATGGAGAAAAGCACCTGAAAAACTGAGGAAACAGAGAATAAA
CTTCCACCAGCGATTTGAGTCTCCAGAATCACAGGCATCTGCTGAACAGCCTGAAATGTGA
AGTTTTCTTGGAGGCTTTTTTGGTCCCATTTGTGAGATCGATGTTGTCCTTAATGATGGGGACACCAGGAAAATGGCAGA
AATGAAAACTGAAGATGGGAAAGTAGAAAAACACTATCTTTTCTATGATGGGGAATCTGTTTCAGGAAAGGTAAACCTAG
CCTTTAAGCAACCTGGAAAGAGGCTAGAGCACCAAGGAATTAGAATTGAATTTGTAGGTCAAATTGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATTCAAGATTGTCTAC
ACATACAATTTGAATATAATAAATCAAAGTACCATTTAAAGGATGTGATTGTTGGAAAAATTTACTTCTTATTAGTAAGA
ATAAAAATCCAACATATGGAGTTACAACTGATCAAAAAAGAGATCACAGGAATTGGACCCAGTACTACGACAGAAACAGA
AACAATTGCCAAATATGAAATAATGGATGGTGCACCAGTAAAAGGTGAATCAATTCCCATAAGACTATTTTTAGCAGGGT
ATGACCCAACTCCAACAATGAGAGATGTGAACAAAAAATTTTCAGTAAGGTACTTTTTGAATCTAGTCCTTGTTGATGAA
GAAGACAGAAGGTACTTCAAGCAGCAGGAGATCATTTTATGGAGAAAAGCACCTGAAAAACTGAGGAAACAGAGAATAAA
CTTCCACCAGCGATTTGAGTCTCCAGAATCACAGGCATCTGCTGAACAGCCTGAAATGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013827 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012907 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000009507 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000122958 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010433 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000014940 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000004519 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011548 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002386 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002567 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000015348 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000000630 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_242 | 97.48 | 55.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1303 | 92.45 | 55.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1663 | 76.25 | 55.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_1796 | 73.01 | 55.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_2352 | 79.01 | 55.59 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000007324 retrocopies