Parental gene:

VPS26A, ENSCHOG00000007324

Aliases:None
Description:vacuolar protein sorting 26 homolog A (S. pombe) [Source:HGNC Symbol;Acc:12711]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_2790:3966..32104(+)


>ENSCHOG00000007324
AGTTTTCTTGGAGGCTTTTTTGGTCCCATTTGTGAGATCGATGTTGTCCTTAATGATGGGGACACCAGGAAAATGGCAGA
AATGAAAACTGAAGATGGGAAAGTAGAAAAACACTATCTTTTCTATGATGGGGAATCTGTTTCAGGAAAGGTAAACCTAG
CCTTTAAGCAACCTGGAAAGAGGCTAGAGCACCAAGGAATTAGAATTGAATTTGTAGGTCAAATTGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATTCAAGATTGTCTAC
ACATACAATTTGAATATAATAAATCAAAGTACCATTTAAAGGATGTGATTGTTGGAAAAATTTACTTCTTATTAGTAAGA
ATAAAAATCCAACATATGGAGTTACAACTGATCAAAAAAGAGATCACAGGAATTGGACCCAGTACTACGACAGAAACAGA
AACAATTGCCAAATATGAAATAATGGATGGTGCACCAGTAAAAGGTGAATCAATTCCCATAAGACTATTTTTAGCAGGGT
ATGACCCAACTCCAACAATGAGAGATGTGAACAAAAAATTTTCAGTAAGGTACTTTTTGAATCTAGTCCTTGTTGATGAA
GAAGACAGAAGGTACTTCAAGCAGCAGGAGATCATTTTATGGAGAAAAGCACCTGAAAAACTGAGGAAACAGAGAATAAA
CTTCCACCAGCGATTTGAGTCTCCAGAATCACAGGCATCTGCTGAACAGCCTGAAATGTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013827 ortholog_one2one 1 retrogene
retro_cfam_1133,
Callithrix jacchus ENSCJAG00000012907 ortholog_one2one 1 retrogene
retro_cjac_1420,
Equus caballus ENSECAG00000009507 ortholog_one2many 1 retrogene
retro_ecab_17,
Homo sapiens ENSG00000122958 ortholog_one2one 1 retrogene
retro_hsap_2688,
Gorilla gorilla ENSGGOG00000010433 ortholog_one2one 1 retrogene
retro_ggor_1875,
Microcebus murinus ENSMICG00000014940 ortholog_one2one 1 retrogene
retro_mmur_1070,
Mustela putorius furo ENSMPUG00000004519 ortholog_one2many 1 retrogene
retro_mputfur_146,
Nomascus leucogenys ENSNLEG00000011548 ortholog_one2one 1 retrogene
retro_nleu_1187,
Pongo abelii ENSPPYG00000002386 ortholog_one2one 1 retrogene
retro_pabe_2293,
Pan troglodytes ENSPTRG00000002567 ortholog_one2one 3 retrogenes
retro_ptro_1815, retro_ptro_2245, retro_ptro_4,
Tupaia belangeri ENSTBEG00000015348 ortholog_one2one 1 retrogene
retro_tbel_1425,
Vicugna pacos ENSVPAG00000000630 ortholog_one2one 1 retrogene
retro_vpac_385,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_242 97.48 55.59
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2. retro_chof_1303 92.45 55.59
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3. retro_chof_1663 76.25 55.24
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4. retro_chof_1796 73.01 55.59
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5. retro_chof_2352 79.01 55.59
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Download FASTA sequences of all ENSCHOG00000007324 retrocopies