Parental gene:

VPS26A, ENSPPYG00000002386

Aliases:None
Description:vacuolar protein sorting-associated protein 26A [Source:RefSeq peptide;Acc:NP_001127000]
Organism:Orangutan (Pongo abelii)
Coordinates:10:66270000..66321228(-)


>ENSPPYG00000002386
ATGAGTTTTCTTGGAGGCTTTTTTGGTCCAATTTGTGAGATCGATATTGTTCTTAATGATGGGGAAACCAGGAAAATGGC
AGAAATGAAAACTGAAGATGGCAAAGTAGAAAAACACTATCTCTTCTATGACGGAGAATCTGTTTCAGGAAAGGTAAACC
TAGCCTTTAAGCAACCTGGAAAGAGGCTAGAACACCAAGGAATTAGAATTGAATTTGTAGGTCAAATTGAACTTTTCAAT
GACAAGAGTAATACTCATGAATTTGTAAACCTAGTGAAAGAACTAGCCTTACCTGGAGAACTGACTCAGAGCAGAAGTTA
TGATTTTGAATTTATGCAAGTTGAAAAGCCATATGAATCTTACATCGGTGCCAATGTCCGCTTGAGGTATTTTCTTAAAG
TGACAATAGTGAGAAGACTGACAGATTTGGTAAAAGAATATGATCTTATTGTTCACCAGCTTGCCACCTATCCTGATGTT
AACAACTCTATTAAGATGGAAGTGGGCATTGAAGATTGTCTACATATAGAATTTGAATATAATAAATCAAAGTATCATTT
AAAGGATGTGATTGTTGGAAAAATTTACTTCTTATTAGTAAGAATAAAAATACAACATATGGAGTTACAGCTGATCAAAA
AAGAGATCACAGGAATTGGACCCAGTACCACAACAGAAACAGAAACAATCGCCAAATATGAAATAATGGATGGTGCACCA
GTAAAAGGTGAATCAATTCCAATAAGACTATTTTTAGCAGGATATGACCCAACTCCAACAATGAGAGATGTGAACAAAAA
ATTTTCAGTAAGGTACTTTTTGAATTTAGTGCTTGTTGATGAGGAAGACCGGAGGTACTTCAAACAGCAGGAGATAATTT
TATGGAGAAAAGCTCCTGAAAAACTGAGGAAACAGAGAACAAACTTTCACCAGCGATTTGAATCTCCAGAATCACAGGCA
TCTGCCGAACAGCCTGAAATGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 24 .99 RPM
SRP007412_cerebellum 35 .02 RPM
SRP007412_heart 17 .70 RPM
SRP007412_kidney 29 .60 RPM
SRP007412_liver 16 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013827 ortholog_one2one 1 retrogene
retro_cfam_1133,
Choloepus hoffmanni ENSCHOG00000007324 ortholog_one2one 5 retrogenes
retro_chof_1303, retro_chof_1663, retro_chof_1796, retro_chof_2352, retro_chof_242,
Callithrix jacchus ENSCJAG00000012907 ortholog_one2one 1 retrogene
retro_cjac_1420,
Equus caballus ENSECAG00000009507 ortholog_one2many 1 retrogene
retro_ecab_17,
Homo sapiens ENSG00000122958 ortholog_one2one 1 retrogene
retro_hsap_2688,
Gorilla gorilla ENSGGOG00000010433 ortholog_one2one 1 retrogene
retro_ggor_1875,
Microcebus murinus ENSMICG00000014940 ortholog_one2one 1 retrogene
retro_mmur_1070,
Mustela putorius furo ENSMPUG00000004519 ortholog_one2many 1 retrogene
retro_mputfur_146,
Nomascus leucogenys ENSNLEG00000011548 ortholog_one2one 1 retrogene
retro_nleu_1187,
Pan troglodytes ENSPTRG00000002567 ortholog_one2one 3 retrogenes
retro_ptro_1815, retro_ptro_2245, retro_ptro_4,
Tupaia belangeri ENSTBEG00000015348 ortholog_one2one 1 retrogene
retro_tbel_1425,
Vicugna pacos ENSVPAG00000000630 ortholog_one2one 1 retrogene
retro_vpac_385,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2293 82.76 87.16
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Download FASTA sequences of all ENSPPYG00000002386 retrocopies