Parental gene: | RPS5, ENSCJAG00000000304 |
| Aliases: | None |
| Description: | ribosomal protein S5 [Source:HGNC Symbol;Acc:10426] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:48739771..48938871(+) |
>ENSCJAG00000000304
ATGACCGAGTGGGAGACAGCAGCACCAGCGGTAGCAGAGACCCCTGACATCAAGCTCTTCGGGAAGTGGAGCACCGATGA
TGTGCAGATCAATGACATTTCCCTGCAGGATTACATTGCAGTGAAGGAGAAGTATGCCAAGTACCTGCCTCACAGTGCAG
GGCGGTATGCCGCGAAGCGCTTCCGCAAAGCCCAGTGCCCCATCGTGGAGCGCCTCACCAACTCCATGATGATGCATGGC
CGCAACAATGGCAAGAAGCTCATGACTGTGCGCATCGTCAAGCATGCCTTCGAGATCATCCACCTGCTCACAGGCGAGAA
CCCTCTGCAGGTCTTGGTAAACGCCATCATCAACAGTGGTCCCCGGGAAGACTCCACACGCATTGGGCGAGCCGGGACTG
TGAGGCGACAGGCTGTGGACGTGTCCCCACTGCGCCGGGTGAATCAGGCCATCTGGCTGCTGTGCACAGGTGCTCGTGAG
GCCGCTTTCCGGAACATCAAGACCATTGCTGAGTGCCTGGCAGATGAGCTCATCAACGCTGCCAAGGGCTCCTCCAACTC
CTATGCCATCAAGAAGAAGGACGAGCTGGAGCGTGTGGCCAAGTCCAACCGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 87 .24 RPM |
| SRP051959_heart | 62 .78 RPM |
| SRP051959_kidney | 52 .71 RPM |
| SRP051959_liver | 101 .91 RPM |
| SRP051959_lung | 73 .32 RPM |
| SRP051959_lymph_node | 123 .97 RPM |
| SRP051959_skeletal_muscle | 112 .09 RPM |
| SRP051959_spleen | 104 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000002366 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000013543 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000083845 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004258 | ortholog_one2many | 4 retrogenes | |
| Macropus eugenii | ENSMEUG00000015400 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012641 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008729 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000008308 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000011921 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013088 | ortholog_one2one | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000011034 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000010500 | ortholog_one2one | 7 retrogenes | |
| Pan troglodytes | ENSPTRG00000011591 | ortholog_one2one | 6 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000005935 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016955 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000076 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001991 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_599 | 69.75 | 78.92 | Please wait, loading  |
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| 2. | retro_cjac_1463 | 76.47 | 90.69 | Please wait, loading |
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| 3. | retro_cjac_2049 | 71.98 | 99.51 | Please wait, loading |
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| 4. | retro_cjac_2050 | 70.05 | 99.51 | Please wait, loading |
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| 5. | retro_cjac_2508 | 79.31 | 99.51 | Please wait, loading |
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| 6. | retro_cjac_4105 | 69.91 | 54.90 | Please wait, loading |
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Download FASTA sequences of all ENSCJAG00000000304 retrocopies