Parental gene:

KPNA7, ENSCJAG00000015943

Aliases:None
Description:Importin subunit alpha [Source:UniProtKB/TrEMBL;Acc:F7I329]
Organism:Marmoset (Callithrix jacchus)
Coordinates:2:12789307..12823828(+)


>ENSCJAG00000015943
CTACCCACCAATATGCCGAGCTTAGATGCTCCAGAAGAGAGGCTGAGAAAATTTAAGTACCGAGGCAAAGATGCATCTCT
GAGGCGACAGCAGAGGATGGCAGTCAGCCTGAAGCTCCGAAAGGCCAAGAAGGATGAACAGACATTAAAGAGAAGGAATA
TCACCAGCTTCTGCCCTGATACCCCTTCTGAAAAAACAGCCAAAGGGGTGACGGTCAGCCTCACTCTGGGTGAAATAATC
CAAGGTGTGAATAGCTCAGATCCAGCCCTGTGTTTCCAGGCCACCCAGACAGCCAGGAAAATGCTATCGCAGGAAAACAA
CCCCCCTCTGAAATTGGTTGTCGACGCAGGCCTCATTCCCAGGATGGTGGAGTTCCTGAAGTCATCACTTTACCCCTGCT
TGCAGTTTGAGGCCGCCTGGGCCCTCACCAACATTGCTGCGGGGACTTCGGAGCAGACTCGAGCTGTGGTAGAAGGGGGA
GCCATCCAGCCCTTGATCGCGCTCCTGTCTTCCCCCAACCTGGCTGTGTGTGAACAGGCAGTGTGGGCTCTTGGTAACAT
AGCTGGTGACGGCCCAGAGTTCAGAGACAAGATCATCTCGAGCAATGCTATCCCACATCTGCTGGCTTTGATTTCACATA
CCCTACCAAATGTCTCATCAGACACCTCAAGCTGGAAAGAAAATCTGACATGGTTGAACAAAGACCTTTGCCGAAACAAG
AACCCGGACCCTTGTGACGCTGCGGTGAAGCAGATACTGCCGGCCCTCCTCCACCTCCTACAGCACCATGACACCGAGGT
TCTCTCCGACGCCTGCTGGGCGCTGTCCTACCTCACTGACAGCTGCAGCAAGCGCATCGGCCAAGTGGTTGACACGGGGG
TCCTGCCCAGGCTGGTGGCGCTCTTGAACAGCTCAGAGCTCAACGTCTTGACCCCATCTCTCCGCACCGTGGGGAACATT
GTCACGGGCACAGATGAACAGACGCAGAGGGCCATCGACACGGGCATACTGAACGTGCTCCCCCAGCTCCTCCAACATAA
CAAGCCCTCTATCCAGAAGGAGGCCGCCTGGGCCCTGAGCAATGTGGCAGCAGGGCCCTGTCACCACATCCAGCAGCTGC
TTGCCTACGACGTCTTGCCTCCCTTGGTGGCTGTGCTAAAACACGGAGACTTTAAAGTCCAGAAAGAGGCTATCTGGACG
GTGGCGAACTTTGTAATGGGGGCCACCCTGGATCAGCTGATCCAGCTCGTCCATTCTGGGATCCTGGAGCCCCTGGTGAA
TCTGCTCACTGCCCCAGATGTTAAAATTGTTCTCATCATCCTCGATGTCATTTCTTTCATCCTCGAGGCAGCAGAGAAAC
TGTCTGAGAAGGAAAACGTGTGTCTTCTGATAGAAGAACTCGGTGGAATTGATAGAATTGAAGCTTTACAACTGCATGAG
AACCGTCAGATTAGCCTGTCGGCTTTGAACATCATCGAGAAGCACTTTAGCGAGGTAAGTGACTTTAATGTGTTTCCCCT
ATCCTTGCTGTATCAGGTCACCTTCCTGGTTCCTGGAAGTTCTTCTAATGCCTTGGGAGCT

Library Parental gene expression (RPM)
SRP051959_colon 0 .02 RPM
SRP051959_heart 0 .00 RPM
SRP051959_kidney 0 .00 RPM
SRP051959_liver 0 .00 RPM
SRP051959_lung 0 .05 RPM
SRP051959_lymph_node 0 .02 RPM
SRP051959_skeletal_muscle 0 .00 RPM
SRP051959_spleen 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015125 ortholog_one2one 2 retrogenes
retro_cfam_459, retro_cfam_861,
Choloepus hoffmanni ENSCHOG00000004243 ortholog_one2one 1 retrogene
retro_chof_805,
Equus caballus ENSECAG00000000554 ortholog_one2one 1 retrogene
retro_ecab_981,
Echinops telfairi ENSETEG00000000096 ortholog_one2one 1 retrogene
retro_etel_1548,
Homo sapiens ENSG00000185467 ortholog_one2one 1 retrogene
retro_hsap_3337,
Mus musculus ENSMUSG00000038770 ortholog_one2one 2 retrogenes
retro_mmus_2844, retro_mmus_3301,
Nomascus leucogenys ENSNLEG00000010827 ortholog_one2one 1 retrogene
retro_nleu_1680,
Otolemur garnettii ENSOGAG00000031106 ortholog_one2many 3 retrogenes
retro_ogar_1289, retro_ogar_3237, retro_ogar_353,
Ochotona princeps ENSOPRG00000015434 ortholog_one2one 2 retrogenes
retro_opri_1101, retro_opri_118,
Pongo abelii ENSPPYG00000017369 ortholog_one2one 1 retrogene
retro_pabe_2750,
Pan troglodytes ENSPTRG00000019446 ortholog_one2one 2 retrogenes
retro_ptro_102, retro_ptro_2142,
Tupaia belangeri ENSTBEG00000009007 ortholog_one2one 3 retrogenes
retro_tbel_1475, retro_tbel_3862, retro_tbel_3962,
Tursiops truncatus ENSTTRG00000002998 ortholog_one2one 2 retrogenes
retro_ttru_1426, retro_ttru_430,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2964 86.15 100.00
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Download FASTA sequences of all ENSCJAG00000015943 retrocopies