Parental gene:

NUTF2, ENSCJAG00000016015

Aliases:None
Description:nuclear transport factor 2 [Source:HGNC Symbol;Acc:13722]
Organism:Marmoset (Callithrix jacchus)
Coordinates:20:21606375..21632532(+)


>ENSCJAG00000016015
ATGGGAGACAAGCCAATTTGGGAGCAGATTGGATCCAGCTTCATTCAACATTATTACCAGTTATTTGATAATGATAGAAC
CCAACTAGGCGCAATTTACATTGACGCGTCATGCCTTACGTGGGAAGGACAACAGTTCCAGGGGAAAGCTGCCATTGTGG
AGAAGTTGTCTAGCCTTCCATTCCAGAAAATCCAGCACAGCATCACGGCGCAGGACCATCAGCCCACGCCAGATAGCTGC
ATCATCAGCATGGTTGTGGGCCAGCTTAAGGCGGATGAAGACCCCATCATGGGGTTCCACCAGATGTTCCTATTAAAGAA
CATCAACGATGCTTGGGTTTGCACCAATGACATGTTCAGGCTCGCCCTGCACAACTTCGGCTGA

Library Parental gene expression (RPM)
SRP051959_colon 2 .82 RPM
SRP051959_heart 4 .16 RPM
SRP051959_kidney 2 .86 RPM
SRP051959_liver 2 .82 RPM
SRP051959_lung 3 .07 RPM
SRP051959_lymph_node 2 .83 RPM
SRP051959_skeletal_muscle 4 .52 RPM
SRP051959_spleen 3 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017548 possible_ortholog 5 retrogenes
retro_amel_1225, retro_amel_134, retro_amel_1485, retro_amel_415, retro_amel_445,
Choloepus hoffmanni ENSCHOG00000003059 ortholog_one2one 3 retrogenes
retro_chof_1386, retro_chof_1619, retro_chof_2488,
Equus caballus ENSECAG00000021530 ortholog_one2one 1 retrogene
retro_ecab_151,
Felis catus ENSFCAG00000008167 ortholog_one2one 3 retrogenes
retro_fcat_154, retro_fcat_743, retro_fcat_845,
Homo sapiens ENSG00000102898 ortholog_one2one 7 retrogenes
retro_hsap_1322, retro_hsap_1480, retro_hsap_1858, retro_hsap_207, retro_hsap_4181, retro_hsap_4854, retro_hsap_544,
Gorilla gorilla ENSGGOG00000023925 ortholog_one2one 5 retrogenes
retro_ggor_1032, retro_ggor_2152, retro_ggor_279, retro_ggor_2806, retro_ggor_3028,
Loxodonta africana ENSLAFG00000031037 ortholog_one2one 1 retrogene
retro_lafr_623,
Macropus eugenii ENSMEUG00000009874 ortholog_one2one 11 retrogenes
retro_meug_1023, retro_meug_136, retro_meug_1539, retro_meug_1585, retro_meug_1778, retro_meug_2140, retro_meug_253, retro_meug_282, retro_meug_352, retro_meug_676, retro_meug_748,
Myotis lucifugus ENSMLUG00000025175 ortholog_one2many 3 retrogenes
retro_mluc_1265, retro_mluc_2194, retro_mluc_911,
Macaca mulatta ENSMMUG00000012038 ortholog_one2many 6 retrogenes
retro_mmul_1160, retro_mmul_1270, retro_mmul_2127, retro_mmul_2169, retro_mmul_2593, retro_mmul_27,
Monodelphis domestica ENSMODG00000005517 ortholog_one2many 6 retrogenes
retro_mdom_1031, retro_mdom_1291, retro_mdom_1488, retro_mdom_1489, retro_mdom_1903, retro_mdom_37,
Mustela putorius furo ENSMPUG00000006737 ortholog_one2one 4 retrogenes
retro_mputfur_229, retro_mputfur_614, retro_mputfur_714, retro_mputfur_962,
Mus musculus ENSMUSG00000008450 possible_ortholog 1 retrogene
retro_mmus_232,
Nomascus leucogenys ENSNLEG00000004889 ortholog_one2one 7 retrogenes
retro_nleu_1295, retro_nleu_1791, retro_nleu_1855, retro_nleu_2374, retro_nleu_2384, retro_nleu_2953, retro_nleu_731,
Oryctolagus cuniculus ENSOCUG00000006322 ortholog_one2many 1 retrogene
retro_ocun_115,
Ochotona princeps ENSOPRG00000013727 ortholog_one2one 4 retrogenes
retro_opri_1089, retro_opri_1102, retro_opri_1170, retro_opri_229,
Procavia capensis ENSPCAG00000015344 ortholog_one2one 1 retrogene
retro_pcap_56,
Pongo abelii ENSPPYG00000007472 ortholog_one2one 7 retrogenes
retro_pabe_1101, retro_pabe_1229, retro_pabe_1515, retro_pabe_3421, retro_pabe_3772, retro_pabe_433, retro_pabe_502,
Pan troglodytes ENSPTRG00000008248 ortholog_one2one 7 retrogenes
retro_ptro_1001, retro_ptro_1239, retro_ptro_2835, retro_ptro_3230, retro_ptro_338, retro_ptro_409, retro_ptro_903,
Pteropus vampyrus ENSPVAG00000016605 ortholog_one2one 1 retrogene
retro_pvam_843,
Sarcophilus harrisii ENSSHAG00000006100 ortholog_one2one 1 retrogene
retro_shar_274,
Sus scrofa ENSSSCG00000030295 possible_ortholog 3 retrogenes
retro_sscr_1223, retro_sscr_710, retro_sscr_740,
Drosophila melanogaster FBgn0031145 ortholog_one2many 1 retrogene
retro_dmel_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_587 81.19 77.95
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cjac_777 53.76 70.87
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_cjac_924 89.76 99.21
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_cjac_1328 96.06 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_cjac_2247 100.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_cjac_2562 81.51 92.13
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_cjac_2864 62.50 80.31
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_cjac_2913 88.57 81.89
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_cjac_2953 77.95 99.21
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_cjac_2978 84.25 99.21
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_cjac_3126 78.90 84.25
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_cjac_3299 95.24 99.21
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_cjac_4044 88.19 99.21
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_cjac_4173 80.47 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000016015 retrocopies