Parental gene:

ENSCJAG00000036558

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:73276320..73285156(-)


>ENSCJAG00000036558
ATGGCCCATTACAAAGCCGCCGACTCGAAGCGTGAGCAGTTCCGGAGGTACTTGGAGAAGTCTGGGGTGCTGGACACACT
GACCAAGGTGTTGGTAGCCTTATATGAAGAACCAGAGAAACCTAACAGTGCTTTGGATTTTTTAAAGCATCACTTAGGAG
CTGCTACCCCAGAAAATCCAGAAATAGAGCTGCTTCGCCTAGAACTGGCTGAAATGAAAGAGAAATATGAAGCTATTATA
GAAGAAAATAAAAAACTGAAAGCAAAGCTTGCTCAGTATGAACCACCTCAGGAGGAGAAGCGTGCTGAATAG

Library Parental gene expression (RPM)
SRP051959_spleen 5 .59 RPM
SRP051959_skeletal_muscle 2 .18 RPM
SRP051959_lymph_node 4 .66 RPM
SRP051959_lung 4 .96 RPM
SRP051959_liver 2 .49 RPM
SRP051959_kidney 5 .95 RPM
SRP051959_heart 2 .53 RPM
SRP051959_colon 3 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000030622 ortholog_one2many 1 retrogene
retro_cfam_1618,
Choloepus hoffmanni ENSCHOG00000013136 ortholog_one2many 3 retrogenes
retro_chof_1349, retro_chof_151, retro_chof_610,
Cavia porcellus ENSCPOG00000020447 ortholog_one2many 1 retrogene
retro_cpor_1195,
Homo sapiens ENSG00000214114 ortholog_one2many 2 retrogenes
retro_hsap_1649, retro_hsap_2251,
Gorilla gorilla ENSGGOG00000005810 ortholog_one2many 2 retrogenes
retro_ggor_1245, retro_ggor_1678,
Loxodonta africana ENSLAFG00000020514 ortholog_one2many 2 retrogenes
retro_lafr_1071, retro_lafr_903,
Macropus eugenii ENSMEUG00000000315 ortholog_one2many 1 retrogene
retro_meug_247,
Mus musculus ENSMUSG00000028647 ortholog_one2many 1 retrogene
retro_mmus_1626,
Nomascus leucogenys ENSNLEG00000011814 ortholog_one2many 2 retrogenes
retro_nleu_1319, retro_nleu_2489,
Oryctolagus cuniculus ENSOCUG00000022203 ortholog_one2many 2 retrogenes
retro_ocun_907, retro_ocun_979,
Otolemur garnettii ENSOGAG00000024435 ortholog_one2many 3 retrogenes
retro_ogar_1283, retro_ogar_1553, retro_ogar_1880,
Pongo abelii ENSPPYG00000001515 ortholog_one2many 1 retrogene
retro_pabe_1400,
Pan troglodytes ENSPTRG00000000565 ortholog_one2many 2 retrogenes
retro_ptro_1120, retro_ptro_1594,
Rattus norvegicus ENSRNOG00000017166 ortholog_one2many 2 retrogenes
retro_rnor_573, retro_rnor_779,
Sus scrofa ENSSSCG00000003649 ortholog_one2many 2 retrogenes
retro_sscr_1176, retro_sscr_1217,
Ictidomys tridecemlineatus ENSSTOG00000021547 ortholog_one2many 2 retrogenes
retro_itri_1518, retro_itri_252,
Tarsius syrichta ENSTSYG00000005690 ortholog_one2many 1 retrogene
retro_tsyr_172,
Tursiops truncatus ENSTTRG00000009583 ortholog_one2many 1 retrogene
retro_ttru_1872,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_5 100.00 100.00
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Download FASTA sequences of all ENSCJAG00000036558 retrocopies