Parental gene:

C1ORF123, ENSCPOG00000011509

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_321:53684..59371(+)


>ENSCPOG00000011509
CTTCAGAAAATCGCGCTGCAGCTTAAAGCCACGCTGGAGAACATCACCAACCTCCGGCCCCTGGGCGAGGACTTCCGGTG
GTACTTGAAGATGAAATGTGGCAATTGTGGTGAAATTTCAGAGAAGTGGCAGTACATCCGACTGATGGACAGCGTGGCAT
TGAAAGGAGGGCGTGGCAGTGCCTCTATGGTCCAGAAGTGCAAGCTGTGTGCACGGGAAAATTCCATCGAGATTTTGAGC
AGCACTATCAAGCCTTATAATGCTGAAGACAATGAGAAGTTCAAGACAATCGTGGAGTTTGAATGCCGGGGCCTAGAACC
AGTTGATTTCCAGCCCCAGGCAGGGTTTGCAGCTGAGGGTGTGGAGTCAGGGACAGTCTTCAGTGACATTAACCTGCAGG
AGAAGGACTGGACTGACTATGATGAGAAGGCTCAGGAGTCTGTGGGAATCTTCGAGGTCACACACCAGTTTGTGAAATGC

Library Parental gene expression (RPM)
SRP017611_liver 21 .85 RPM
SRP017611_kidney 19 .68 RPM
SRP017611_brain 38 .82 RPM
SRP040447_lung 22 .82 RPM
SRP040447_skeletal_muscle 12 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004526 ortholog_one2one 3 retrogenes
retro_cjac_2948, retro_cjac_3149, retro_cjac_3186,
Homo sapiens ENSG00000162384 ortholog_one2one 1 retrogene
retro_hsap_192,
Gorilla gorilla ENSGGOG00000004027 ortholog_one2one 1 retrogene
retro_ggor_271,
Microcebus murinus ENSMICG00000006397 ortholog_one2one 1 retrogene
retro_mmur_1113,
Myotis lucifugus ENSMLUG00000002439 ortholog_one2many 1 retrogene
retro_mluc_101,
Mus musculus ENSMUSG00000028608 ortholog_one2one 1 retrogene
retro_mmus_975,
Nomascus leucogenys ENSNLEG00000017988 ortholog_one2one 1 retrogene
retro_nleu_1001,
Oryctolagus cuniculus ENSOCUG00000029317 ortholog_one2one 1 retrogene
retro_ocun_770,
Otolemur garnettii ENSOGAG00000013324 ortholog_one2one 1 retrogene
retro_ogar_861,
Ochotona princeps ENSOPRG00000009003 ortholog_one2one 2 retrogenes
retro_opri_351, retro_opri_711,
Pongo abelii ENSPPYG00000001336 ortholog_one2one 1 retrogene
retro_pabe_443,
Pan troglodytes ENSPTRG00000000752 ortholog_one2many 1 retrogene
retro_ptro_99,
Rattus norvegicus ENSRNOG00000012724 ortholog_one2one 3 retrogenes
retro_rnor_1999, retro_rnor_2403, retro_rnor_2705,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1142 60.19 61.88
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Download FASTA sequences of all ENSCPOG00000011509 retrocopies