Parental gene: | BZW2, ENSDNOG00000001663 |
| Aliases: | None |
| Description: | basic leucine zipper and W2 domains 2 [Source:HGNC Symbol;Acc:18808] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_7233:215027..287375(+) |
>ENSDNOG00000001663
ATGAATAAGCATCAGAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGATGAAAAAGAGAAATTCGAACC
CACAGTCTTCAGGGATACACTTGTCCAGGGACTTAATGAGGCTGGTGATGACCTTGAAGCTGTAGCCAAGTTTCTGGACT
CTACAGGCTCAAGATTAGATTATCGTCGCTATGCAGACACACTCTTCGATATTCTGGTAGCTGGCAGTATGCTGGCTCCT
GGAGGAACACGCATAGATGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTTTCAGCAAATGAAGATCACGAAAC
CATCCGAAACTATGCTCAGGTCTTCAATAAACTCATCAGGAGATACAAGTATTTGGAAAAGGCATTTGAGGATGAAATGA
AAAAGCTTCTCCTCTTCCTTAAAGCCTTTTCCGAAACCGAGCAGACAAAATTGGCAATGCTGTCGGGGATCCTGCTGGGC
AATGGCACTCTTCCTGCCACCATCCTCACCAGTCTCTTCACTGACAACTTAGTCAAAGAAGGCATCGCAGCCTCATTTGC
TGTCAAGCTTTTTAAAGCATGGATGGCAGAAAAAGATGCCAACTCTGTTACCTCTTCTTTGAGAAAAGCCAACATAGACA
AGAGGCTGCTTGAGCTCTTTCCAGTTAACAGACAGAGTGTGGATCATTTTGCTAAATATTTCACTGATGCAGGTTTGAAG
GAGCTTTCTGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACGAGGAAGGAACTCCAGAAGGAGCTCCAGGAGCGTCTTTC
TCAGGAATGCCCAATCAAGGAGATGGTGCTGTATGTCAAGGAAGAAAAGAGGAATGATCTTCCAGAAACAGCAGTGATTG
GACTTCTGTGGACCTGTATAATGAATGCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCAATACGCTCCCCTACTGGCTGTTTTCAGCTCCCAAGGTCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGA
ATATTGTTATGACAACATCCACTTCATGAAAGCCTTTCAGAAGATCGTGGTTCTCTTTTATAAAGCTGATGTCCTGAGTG
AAGAAGCGATATTGAAATGGTACAAAGAAGCACATGTTGCCAAAGGCAAAAGTGTTTTTCGTGAGCAGATGAAGAAATTT
GTNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCTGAATCAGAAGGTGAAGAAAATTAG
ATGAATAAGCATCAGAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGATGAAAAAGAGAAATTCGAACC
CACAGTCTTCAGGGATACACTTGTCCAGGGACTTAATGAGGCTGGTGATGACCTTGAAGCTGTAGCCAAGTTTCTGGACT
CTACAGGCTCAAGATTAGATTATCGTCGCTATGCAGACACACTCTTCGATATTCTGGTAGCTGGCAGTATGCTGGCTCCT
GGAGGAACACGCATAGATGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTTTCAGCAAATGAAGATCACGAAAC
CATCCGAAACTATGCTCAGGTCTTCAATAAACTCATCAGGAGATACAAGTATTTGGAAAAGGCATTTGAGGATGAAATGA
AAAAGCTTCTCCTCTTCCTTAAAGCCTTTTCCGAAACCGAGCAGACAAAATTGGCAATGCTGTCGGGGATCCTGCTGGGC
AATGGCACTCTTCCTGCCACCATCCTCACCAGTCTCTTCACTGACAACTTAGTCAAAGAAGGCATCGCAGCCTCATTTGC
TGTCAAGCTTTTTAAAGCATGGATGGCAGAAAAAGATGCCAACTCTGTTACCTCTTCTTTGAGAAAAGCCAACATAGACA
AGAGGCTGCTTGAGCTCTTTCCAGTTAACAGACAGAGTGTGGATCATTTTGCTAAATATTTCACTGATGCAGGTTTGAAG
GAGCTTTCTGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACGAGGAAGGAACTCCAGAAGGAGCTCCAGGAGCGTCTTTC
TCAGGAATGCCCAATCAAGGAGATGGTGCTGTATGTCAAGGAAGAAAAGAGGAATGATCTTCCAGAAACAGCAGTGATTG
GACTTCTGTGGACCTGTATAATGAATGCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCAATACGCTCCCCTACTGGCTGTTTTCAGCTCCCAAGGTCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGA
ATATTGTTATGACAACATCCACTTCATGAAAGCCTTTCAGAAGATCGTGGTTCTCTTTTATAAAGCTGATGTCCTGAGTG
AAGAAGCGATATTGAAATGGTACAAAGAAGCACATGTTGCCAAAGGCAAAAGTGTTTTTCGTGAGCAGATGAAGAAATTT
GTNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCTGAATCAGAAGGTGAAGAAAATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 61 .45 RPM |
| SRP012922_cerebellum | 11 .41 RPM |
| SRP012922_heart | 224 .84 RPM |
| SRP012922_kidney | 10 .95 RPM |
| SRP012922_liver | 9 .13 RPM |
| SRP012922_lung | 38 .94 RPM |
| SRP012922_quadricep_muscle | 261 .36 RPM |
| SRP012922_spleen | 41 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000022038 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017045 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000005256 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000017763 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000014571 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000002506 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000009806 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009867 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_575 | 64.90 | 99.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_2177 | 80.86 | 59.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_2422 | 50.47 | 73.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_2649 | 77.92 | 72.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000001663 retrocopies