Parental gene:

BZW2, ENSECAG00000022038

Aliases:None
Description:basic leucine zipper and W2 domains 2 [Source:HGNC Symbol;Acc:18808]
Organism:Horse (Equus caballus)
Coordinates:4:49136868..49175002(+)


>ENSECAG00000022038
GTTTTCAGAAATTTTATGAATAAGCATCAGAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGATGAAAA
AGAGAAATTCGAACCCACAGTCTTCAGGGATACACTTGTCCAGGGGCTTAATGAAGCTGGGGATGACCTTGAAGCTGTAG
CCAAGTTTCTGGACTCTACAGGCTCAAGATTAGATTATCGTCGCTATGCAGACACGCTCTTCGATATCCTGGTGGCTGGC
AGTATGCTCGCCCCTGGCGGAACACGCATAGATGATGGTGACAAGACCAAGATGACCAACCACTGTGTGTTTTCAGCAAA
TGAAGATCATGAAACCATCCGAAACTATGCTCAGGTCTTCAATAAACTCATCAGGAGATATAAGTATTTGGAAAAGGCAT
TTGAGGATGAAATGAAAAAGCTTCTCCTCTTCCTTAAAGCCTTTTCCGAAACAGAGCAGACAAAGTTGGCAATGCTGTCT
GGGATCCTGCTGGGCAACGGCACCCTTCCTGCCACCATCCTTACCAGTCTCTTCACCGACAGCTTAGTCAAGGAAGGCAT
TGCAGCCTCATTTGCTGTCAAGCTTTTTAAAGCATGGATGGCAGAAAAAGATGCCAACTCTGTGACCTCTTCTTTGAGAA
AAGCCAACTTAGACAAGAGGCTGCTTGAGCTCTTTCCAGTTAACAGACAGAGTGTGGATCATTTTGCTAAGTACTTCACT
GATGCAGGTCTGAAGGAGCTTTCTGACTTCCTGCGAGTCCAGCAGTCCCTGGGCACCAGGAAGGAACTGCAGAAGGAGCT
CCAGGAGCGTCTTTCTCAGGAATGCCCGATTAAGGAGGTGGTGCTCTATGTGAAAGAAGAGATGAAGAGGAATGACCTTC
CGGAAACAGCAGTGATTGGACTGCTATGGACCTGTATAATGAATGCTGTCGAGTGGAACAAGAAGGAAGAACTCGTTGCA
GAGCAGGCTCTTAAGCACCTGAAGCAATACGCTCCTCTCCTGGCTGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCT
CCTCCAGAAGGTTCAGGAATACTGCTATGATAACATCCATTTCATGAAAGCCTTTCAGAAGATCGTGGTTCTCTTTTATA
AAGCGGATGTGCTGAGTGAAGAAGCGATATTGAAATGGTACAAAGAAGCGCATGTTGCCAAAGGCAAGAGTGTTTTTCTT
GACCAGATGAAGAAATTTGTCGAGTGGTTACAAAACGCAGAAGAAGAATCTGAATCGGAAGGTGAGGAAAGTTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 32 .97 RPM
SRP021940_embryo 74 .29 RPM
SRP021940_cerebellum 23 .01 RPM
SRP021940_testis 3 .20 RPM
SRP021940_placental_villous 42 .10 RPM
SRP021940_articular_cartilage 26 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000001663 ortholog_one2one 4 retrogenes
retro_dnov_2177, retro_dnov_2422, retro_dnov_2649, retro_dnov_575,
Macaca mulatta ENSMMUG00000017045 ortholog_one2one 1 retrogene
retro_mmul_1457,
Ochotona princeps ENSOPRG00000005256 ortholog_one2many 2 retrogenes
retro_opri_665, retro_opri_9,
Pongo abelii ENSPPYG00000017763 ortholog_one2one 1 retrogene
retro_pabe_2385,
Pteropus vampyrus ENSPVAG00000014571 ortholog_one2one 1 retrogene
retro_pvam_481,
Ictidomys tridecemlineatus ENSSTOG00000002506 ortholog_one2one 1 retrogene
retro_itri_1286,
Tarsius syrichta ENSTSYG00000009806 ortholog_one2one 1 retrogene
retro_tsyr_1923,
Tursiops truncatus ENSTTRG00000009867 ortholog_one2one 1 retrogene
retro_ttru_162,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_1121 90.80 99.53
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Download FASTA sequences of all ENSECAG00000022038 retrocopies