Parental gene: | MXI1, ENSDNOG00000002479 |
| Aliases: | None |
| Description: | MAX interactor 1, dimerization protein [Source:HGNC Symbol;Acc:7534] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_6287:8354..141582(+) |
>ENSDNOG00000002479
ATGGGCAAACGCGGGCGGCCGCGCAAGGAGGCGCGCTGCGAGGGCGCGGGGCTGTTCCCCGCCGCGCCCCCGCCCGTGCC
CCCGGCCGCGGCCGCGCCACAGCCCCCCGCCCAGCCCGAGGAGCCCGCGGGGGCCAAGCCAGGGTGCCCTTTTTCGGACA
TTTTCAACACCAGCGAGAACTCGATGGAGAAGCACATCAACACTTTTCTGCAGAACGTGCAGATTCTGCTCGAGGCCCCC
AGCTACCTGGAGCAGATCGAGAAAGAAAACAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGTCTACACACAATGAGCTGGAAAAGAATCGACGAGCTCATCTGCGCCTGTGTTTAGAACGCTTGAAGGTTCTG
ATTCCACTAGGACCAGACTGCACCAGGCACACAACACTTGGTTTGCTCAACAAAGCCAAAGCACACATCAAGAAACTTGA
AGAAGCTGAAAGGAAGAGCCAGCACCAGCTTGAGAACTTGGAACGAGAACAGAGATTTTTAAAGCGGCGATTGGAACAGC
TGCAGGGTCCTCAGGAGATGGAACGAATACGAATGGACAGCATTGGATCAACTATTTCTTCAGATCGTTCTGATTCAGAG
CGAGAGGAAATTGAAGTGGATGTTGAAAGCACAGAGTTCTCCCATGGAGAAGTGGACAATATCAGTACCACCAGCATCAG
TGACATTGATGACCACAGCAGCCTGCAGAGTATTGGAAGTGACGAAGGTTACTCCAGTGCCAGTGTCAAACTTTCATTCA
CTTCCTAG
ATGGGCAAACGCGGGCGGCCGCGCAAGGAGGCGCGCTGCGAGGGCGCGGGGCTGTTCCCCGCCGCGCCCCCGCCCGTGCC
CCCGGCCGCGGCCGCGCCACAGCCCCCCGCCCAGCCCGAGGAGCCCGCGGGGGCCAAGCCAGGGTGCCCTTTTTCGGACA
TTTTCAACACCAGCGAGAACTCGATGGAGAAGCACATCAACACTTTTCTGCAGAACGTGCAGATTCTGCTCGAGGCCCCC
AGCTACCTGGAGCAGATCGAGAAAGAAAACAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGTCTACACACAATGAGCTGGAAAAGAATCGACGAGCTCATCTGCGCCTGTGTTTAGAACGCTTGAAGGTTCTG
ATTCCACTAGGACCAGACTGCACCAGGCACACAACACTTGGTTTGCTCAACAAAGCCAAAGCACACATCAAGAAACTTGA
AGAAGCTGAAAGGAAGAGCCAGCACCAGCTTGAGAACTTGGAACGAGAACAGAGATTTTTAAAGCGGCGATTGGAACAGC
TGCAGGGTCCTCAGGAGATGGAACGAATACGAATGGACAGCATTGGATCAACTATTTCTTCAGATCGTTCTGATTCAGAG
CGAGAGGAAATTGAAGTGGATGTTGAAAGCACAGAGTTCTCCCATGGAGAAGTGGACAATATCAGTACCACCAGCATCAG
TGACATTGATGACCACAGCAGCCTGCAGAGTATTGGAAGTGACGAAGGTTACTCCAGTGCCAGTGTCAAACTTTCATTCA
CTTCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 17 .70 RPM |
| SRP012922_cerebellum | 28 .04 RPM |
| SRP012922_heart | 9 .05 RPM |
| SRP012922_kidney | 13 .96 RPM |
| SRP012922_liver | 8 .98 RPM |
| SRP012922_lung | 18 .17 RPM |
| SRP012922_quadricep_muscle | 23 .02 RPM |
| SRP012922_spleen | 37 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000006556 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000022901 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000025025 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000022128 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000003400 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_668 | 73.46 | 53.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1336 | 69.51 | 53.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000002479 retrocopies