Parental gene: | ENSDNOG00000015893 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_6310:16482..81270(+) |
>ENSDNOG00000015893
AGGGAGGCGCGGCGGGAGGAGGGCGAGGCCGAGGTCCGGGAGCACCCCGAGCACTGGTTCTCCGAGTGGCAGCGCCTGGC
CGAGGCCGCGCAGGCCGAGCAGCTGCCCGAGCTGCAGGAGGCGGCGGCCGCGCAGCCCGAGCACAAGCCGCGGGAGCTGC
GGCGCCTCTGCCAGAACCCGGCCACCGCCGCGGCCCGGCTCCACAAAGACCGAGTGTGTCAGCAGCCAGGACTTTCTCTC
TGGGTCCCCTTCCAAAATGCAGCCACCGCCGTCACCAATCTCTACAAAGAAAGTGTGGATACCCATCAGCGAAGTTTTGA
TATTGGAATTCAGATTGGCTATCAGCGTCGCAATAAGGATGTGTTGGCTTGGGTTAAACGCAGAAGAACTATACGGAGAG
AAGACTTGATCAGCTTCCTGTGTGGAAAAGCTCCTCCACCTCGAAACTCTAGAGCTCCCCCAAGACTAACTGTGGAGTCC
CCTAACCGAGCTACTTCAACGGAAACTAGCTCATCTGTAGAGACTGATGTGCAGCCCTTCCCGGAAACTGTAGCTCTGCA
TGGGCTTAGTGGTGCGATGGCCAGCATAGCGCGCTCCAGTCCAGGCTCTCCTCCACGGGTAAGCAGCGGATCGAATGCTC
GTAGTCGGAGAAGTGGACTCCACGATGTCGATGTGAACACTTTCACATCAGAAGAAATGGCACTCCACTTGGACAATGGT
GGAGCTAGAAAGCGTACCTCAGCCCAATGGGGCGATGTCTTTACAGACTCAACAACCCATAAACGCAACAGAATGATCTA
A
AGGGAGGCGCGGCGGGAGGAGGGCGAGGCCGAGGTCCGGGAGCACCCCGAGCACTGGTTCTCCGAGTGGCAGCGCCTGGC
CGAGGCCGCGCAGGCCGAGCAGCTGCCCGAGCTGCAGGAGGCGGCGGCCGCGCAGCCCGAGCACAAGCCGCGGGAGCTGC
GGCGCCTCTGCCAGAACCCGGCCACCGCCGCGGCCCGGCTCCACAAAGACCGAGTGTGTCAGCAGCCAGGACTTTCTCTC
TGGGTCCCCTTCCAAAATGCAGCCACCGCCGTCACCAATCTCTACAAAGAAAGTGTGGATACCCATCAGCGAAGTTTTGA
TATTGGAATTCAGATTGGCTATCAGCGTCGCAATAAGGATGTGTTGGCTTGGGTTAAACGCAGAAGAACTATACGGAGAG
AAGACTTGATCAGCTTCCTGTGTGGAAAAGCTCCTCCACCTCGAAACTCTAGAGCTCCCCCAAGACTAACTGTGGAGTCC
CCTAACCGAGCTACTTCAACGGAAACTAGCTCATCTGTAGAGACTGATGTGCAGCCCTTCCCGGAAACTGTAGCTCTGCA
TGGGCTTAGTGGTGCGATGGCCAGCATAGCGCGCTCCAGTCCAGGCTCTCCTCCACGGGTAAGCAGCGGATCGAATGCTC
GTAGTCGGAGAAGTGGACTCCACGATGTCGATGTGAACACTTTCACATCAGAAGAAATGGCACTCCACTTGGACAATGGT
GGAGCTAGAAAGCGTACCTCAGCCCAATGGGGCGATGTCTTTACAGACTCAACAACCCATAAACGCAACAGAATGATCTA
A
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 7 .78 RPM |
| SRP012922_cerebellum | 5 .36 RPM |
| SRP012922_heart | 5 .34 RPM |
| SRP012922_kidney | 3 .56 RPM |
| SRP012922_liver | 4 .64 RPM |
| SRP012922_lung | 10 .23 RPM |
| SRP012922_quadricep_muscle | 7 .27 RPM |
| SRP012922_spleen | 8 .70 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010719 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000018981 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010925 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000009430 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000182831 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010744 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000005378 | ortholog_one2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000014707 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000022507 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010106 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003909 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007088 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007751 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002545 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000028454 | ortholog_many2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000009324 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_827 | 77.13 | 94.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1575 | 80.25 | 86.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_2266 | 74.76 | 74.81 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000015893 retrocopies