Parental gene:

ENSDNOG00000017212

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_5092:22558..47500(-)


>ENSDNOG00000017212
CGGGGGGGGGGCCCCAATCGCGCAAATAGAGAGTCCTCTTTGGCTTCTCGACTCGGTCCTGTTTCGACAGCGAACATGTC
TCAGCCTGTCAGAAATAGGAAGGTCGTTGATTATTCACAGTTTCAGGAATCTGATGATGCTGATGANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTGAAGACTCAGAAGAAAAAGAAGTAAAAACCAAGAAGGATGATTCTCACTCAGCAGAAGACAGCGAAGATGA
AAAAGAAGATCATAAAAATGTGCGCCAGCAACGGCAGGCAGCATCTAAAGCAGCTTCTAAACAGAGAGAGATGCTCATGG
AAGATGTGGGCAGTGAGGAAGAACAAGAAGAAGAGGATGAAGCACCATTCCAGGAGAAAGATTCTGGCAGTGATGAAGAT
TTCCTAATGGAAGATGATGACGATAGTGACTATGGCAGTTCAAAAAAGAAAAACAAAAAGATGGTTAAGAAGGCCAAACC
TGAGAGAAAAGAAAAGAAAATGCCCAAACCCAGGCTAAAGGCCACCGTGACGCCAAGTCCAGTGAAAGGCAAAGGGAAAG
TGGGTCGTCCCACAGCTTCAAAGGCATCAAAGGAAAAGACTCCTTCCCCCAAAGAAGATGATGATGAACCAGAAAGCCCT
CCAGAAAAGAAAACATCTGCAAGCCCTCCACCCGAAAAATCTGGGGATGAAGGATCTGAAGATGAAGCTCAGTCTGGGGA
AGATTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 81 .68 RPM
SRP012922_cerebellum 105 .85 RPM
SRP012922_heart 52 .67 RPM
SRP012922_kidney 145 .11 RPM
SRP012922_liver 56 .66 RPM
SRP012922_lung 136 .99 RPM
SRP012922_quadricep_muscle 59 .19 RPM
SRP012922_spleen 151 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012950 ortholog_many2many 1 retrogene
retro_amel_339,
Bos taurus ENSBTAG00000008001 ortholog_one2many 1 retrogene
retro_btau_541,
Choloepus hoffmanni ENSCHOG00000001855 ortholog_one2many 1 retrogene
retro_chof_437,
Dipodomys ordii ENSDORG00000003183 ortholog_one2many 1 retrogene
retro_dord_688,
Homo sapiens ENSG00000069275 ortholog_one2many 1 retrogene
retro_hsap_521,
Gorilla gorilla ENSGGOG00000026655 ortholog_one2many 1 retrogene
retro_ggor_480,
Macropus eugenii ENSMEUG00000007829 ortholog_one2many 2 retrogenes
retro_meug_2015, retro_meug_372,
Macaca mulatta ENSMMUG00000005645 ortholog_one2many 1 retrogene
retro_mmul_422,
Monodelphis domestica ENSMODG00000001832 ortholog_many2many 1 retrogene
retro_mdom_980,
Nomascus leucogenys ENSNLEG00000014564 ortholog_one2many 1 retrogene
retro_nleu_2576,
Pan troglodytes ENSPTRG00000001904 ortholog_one2many 1 retrogene
retro_ptro_389,
Rattus norvegicus ENSRNOG00000047287 ortholog_one2many 2 retrogenes
retro_rnor_2337, retro_rnor_2338,
Tupaia belangeri ENSTBEG00000015641 ortholog_one2many 1 retrogene
retro_tbel_2591,
Tarsius syrichta ENSTSYG00000000910 ortholog_one2many 1 retrogene
retro_tsyr_987,
Vicugna pacos ENSVPAG00000003751 ortholog_one2many 1 retrogene
retro_vpac_313,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_6 96.22 69.03
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2. retro_dnov_348 74.36 57.09
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Download FASTA sequences of all ENSDNOG00000017212 retrocopies