Parental gene:

NUCKS1, ENSPTRG00000001904

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:184578945..184617216(-)


>ENSPTRG00000001904
ATGTCGCGGCCTGTCAGAAATAGGAAGGTTGTTGATTACTCACAGTTTCAGGAATCTGATGATGCAGATGAAGATTATGG
AAGAGATTCGGGCCCTCCCACTAAGAAAATTCGATCATCTCCCCGAGAAGCTAAAAATAAGAGGCGATCTGGAAAGAATT
CACAGGAAGATAGTGAGGACTCAGAAGACAAAGATGTGAAGACCAAGAAGGATGATTCTCACTCAGCAGAGGATAGTGAA
GATGAAAAAGAAGATCATAAAAATGTGCGCCAACAACGGCAGGCGGCGTCTAAAGCAGCTTCTAAACAGAGAGAGATGCT
CATGGAAGATGTGGGCAGTGAGGAAGAACAAGAAGAGGAGGATGAGGCACCGTTCCAGGAGAAAGATTCCGGCAGCGATG
AAGATTTCCTAATGGAAGATGATGACGATAGTGACTATGGCAGTTCGAAAAAGAAAAACAAAAAGATGGTTAAGAAGTCC
AAACCTGAAAGAAAAGAAAAGAAAATGCCCAAACCCAGACTAAAGGCTACAGTGACGCCAAGTCCAGTGAAAGGCAAAGG
GAAAGTGGGTCGCCCCACAGCTTCAAAGGCATCAAAGGAAAAGACTCCTTCTCCCAAAGAAGAAGATGAGGAACCGGAAA
GCCCGCCAGAAAAGAAAACATCTACAAGCCCCCCACCCGAGAAATCTGGGGATGAAGGGTCTGAAGATGAAGCCCCTTCT
GGGGAGGATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 220 .27 RPM
SRP007412_cerebellum 300 .16 RPM
SRP007412_heart 215 .27 RPM
SRP007412_kidney 187 .17 RPM
SRP007412_liver 130 .02 RPM
SRP007412_testis 84 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012950 ortholog_one2one 1 retrogene
retro_amel_339,
Bos taurus ENSBTAG00000008001 ortholog_one2one 1 retrogene
retro_btau_541,
Choloepus hoffmanni ENSCHOG00000001855 ortholog_one2one 1 retrogene
retro_chof_437,
Dasypus novemcinctus ENSDNOG00000017212 ortholog_one2many 2 retrogenes
retro_dnov_348, retro_dnov_6,
Dipodomys ordii ENSDORG00000003183 ortholog_one2one 1 retrogene
retro_dord_688,
Homo sapiens ENSG00000069275 ortholog_one2one 1 retrogene
retro_hsap_521,
Gorilla gorilla ENSGGOG00000026655 ortholog_one2one 1 retrogene
retro_ggor_480,
Macropus eugenii ENSMEUG00000007829 ortholog_one2one 2 retrogenes
retro_meug_2015, retro_meug_372,
Macaca mulatta ENSMMUG00000005645 ortholog_one2one 1 retrogene
retro_mmul_422,
Monodelphis domestica ENSMODG00000001832 ortholog_one2many 1 retrogene
retro_mdom_980,
Nomascus leucogenys ENSNLEG00000014564 ortholog_one2one 1 retrogene
retro_nleu_2576,
Rattus norvegicus ENSRNOG00000047287 ortholog_one2one 2 retrogenes
retro_rnor_2337, retro_rnor_2338,
Tupaia belangeri ENSTBEG00000015641 ortholog_one2one 1 retrogene
retro_tbel_2591,
Tarsius syrichta ENSTSYG00000000910 ortholog_one2one 1 retrogene
retro_tsyr_987,
Vicugna pacos ENSVPAG00000003751 ortholog_one2one 1 retrogene
retro_vpac_313,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_389 66.53 95.88
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000001904 retrocopies