Parental gene:

NUCKS1, ENSVPAG00000003751

Aliases:None
Description:nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:HGNC Symbol;Acc:29923]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_2883:169018..194931(-)


>ENSVPAG00000003751
GACGGGGGAGCGGGGGGCTCGTCTGATGGGGCCCTGAACCAAGGAGCGGCGGAATTTGAGAAGCCAGCAGCTCGGGGTTC
GGCGGCAGCAGCCCCATCGGCCGAAGTTGGGGGGTGGGGCGCCGAGCGCGCGGGGGGGGGGTCCGGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATAGGAAGGTCGTTGATTATTCACAGTTTCAGGAA
TCTGACGATGCTGATGAAGATTATGGAAGAGATTCAGGCCCTCCAACTAAGAAAATTCGATCTTCTCCCCGAGAAGCTAA
AAATAAGAGGCGATCTGGAAAGAATTCACAGGAAGATAGNNNNNNNNNAGAAGAAAAAGATGTGAAGGCCAAGAAGGATG
ATTCTCACTCAGCAGAGGACAGTGAAGATGAAAAAGAAGATCATAAAAATGTGCGCCAGCAACGGCAGGCAGCCTCTAAA
GCAGCCTCTAAACAGAGGGAGATGCTCATGGAAGATGTGGGCAGTGAAGAAGAACAAGAAGACGAGGATGAGGCACCATT
CCAGGAGAAAGATTCCGGCAGTGATGAGGATTTCCTAATGGAAGATGATGATGATAGTGACTATGGCAGTTCAAAAAAGA
AAAACAAAAAGATGGTTAAGAAGTCCAAACCTGAGAGAAAAGAAAAGAAAATGCCCAAACCCAGGCTAAAGGCCACAGTG
ACGCCAAGTCCTGTGAAAGGCAAAGGGAAAGTGGGTCGCCCCACCGCTTCAAAGGCTTCAAAGGAAAAGACTCCTTCTCC
CAAAGAAGAAGACGAGGAACCCGAAAGCCCTCCAGAAAAGAAAGCTTCTGCCAGCCCCCCGCCCGAGAAGTCTGGGGATG
AAGGGTCTGAAGATGAAGCCCAGTCTGGGGAGGATTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012950 ortholog_one2one 1 retrogene
retro_amel_339,
Bos taurus ENSBTAG00000008001 ortholog_one2one 1 retrogene
retro_btau_541,
Choloepus hoffmanni ENSCHOG00000001855 ortholog_one2one 1 retrogene
retro_chof_437,
Dasypus novemcinctus ENSDNOG00000017212 ortholog_one2many 2 retrogenes
retro_dnov_348, retro_dnov_6,
Dipodomys ordii ENSDORG00000003183 ortholog_one2one 1 retrogene
retro_dord_688,
Homo sapiens ENSG00000069275 ortholog_one2one 1 retrogene
retro_hsap_521,
Gorilla gorilla ENSGGOG00000026655 ortholog_one2one 1 retrogene
retro_ggor_480,
Macropus eugenii ENSMEUG00000007829 ortholog_one2one 2 retrogenes
retro_meug_2015, retro_meug_372,
Macaca mulatta ENSMMUG00000005645 ortholog_one2one 1 retrogene
retro_mmul_422,
Monodelphis domestica ENSMODG00000001832 ortholog_one2many 1 retrogene
retro_mdom_980,
Nomascus leucogenys ENSNLEG00000014564 ortholog_one2one 1 retrogene
retro_nleu_2576,
Pan troglodytes ENSPTRG00000001904 ortholog_one2one 1 retrogene
retro_ptro_389,
Rattus norvegicus ENSRNOG00000047287 ortholog_one2one 2 retrogenes
retro_rnor_2337, retro_rnor_2338,
Tupaia belangeri ENSTBEG00000015641 ortholog_one2one 1 retrogene
retro_tbel_2591,
Tarsius syrichta ENSTSYG00000000910 ortholog_one2one 1 retrogene
retro_tsyr_987,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_313 72.26 50.49
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Download FASTA sequences of all ENSVPAG00000003751 retrocopies