Parental gene: | RPL10A, ENSECAG00000014090 |
| Aliases: | None |
| Description: | ribosomal protein L10a [Source:HGNC Symbol;Acc:10299] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 20:35537662..35539582(+) |
>ENSECAG00000014090
AGCAGCAAAGTCTCCCGCGACACCCTGTACGAGGCGGTGCGGGAAGTCCTGCACGGGAACCAGCGCAAGCGGAGTAAGTT
TCTGGAGACGGTGGAGCTGCAGATCAGCCTGAAGAACTATGACCCCCAGAAGGACAAGCGCTTCTCGGGCACCGTCAGGC
TCAAGTCCACTCCGCGCCCCAAGTTCTCCGTGTGTGTCCTGGGGGACCAGCAGCACTGCGACGAGGCCAAGGCCGTGGAC
ATCCCCCACATGGACATCGAGGCCCTGAAGAAGCTCAACAAGAACAAGAAGCTGGTCAAGAAGCTGGCCAAGAAGTACGA
TGCCTTTTTGGCTTCGGAGTCTCTGATCAAGCAGATCCCACGAATTCTGGGCCCAGGCTTGAATAAGGCTGGCAAGTTCC
CCTCCTTGCTGACCCATAATGAGAACATGGTGGCCAAAGTTGATGAGGTCAAGTCCACGATCAAATTCCAGATGAAGAAG
GTGCTGTGTCTGGCCGTGGCTGTTGGCCACGTGAAGATGACAGATGACGAGCTTGTGTACAACATCCACTTGGCTGTCAA
TTTCCTGGTATCATTGCTCAAGAAGAATTGGCAGAACGTCCGGGCTTTATACATCAAGAGCACCATGGGCAAGCCCCAGC
GCCTGTACTAA
AGCAGCAAAGTCTCCCGCGACACCCTGTACGAGGCGGTGCGGGAAGTCCTGCACGGGAACCAGCGCAAGCGGAGTAAGTT
TCTGGAGACGGTGGAGCTGCAGATCAGCCTGAAGAACTATGACCCCCAGAAGGACAAGCGCTTCTCGGGCACCGTCAGGC
TCAAGTCCACTCCGCGCCCCAAGTTCTCCGTGTGTGTCCTGGGGGACCAGCAGCACTGCGACGAGGCCAAGGCCGTGGAC
ATCCCCCACATGGACATCGAGGCCCTGAAGAAGCTCAACAAGAACAAGAAGCTGGTCAAGAAGCTGGCCAAGAAGTACGA
TGCCTTTTTGGCTTCGGAGTCTCTGATCAAGCAGATCCCACGAATTCTGGGCCCAGGCTTGAATAAGGCTGGCAAGTTCC
CCTCCTTGCTGACCCATAATGAGAACATGGTGGCCAAAGTTGATGAGGTCAAGTCCACGATCAAATTCCAGATGAAGAAG
GTGCTGTGTCTGGCCGTGGCTGTTGGCCACGTGAAGATGACAGATGACGAGCTTGTGTACAACATCCACTTGGCTGTCAA
TTTCCTGGTATCATTGCTCAAGAAGAATTGGCAGAACGTCCGGGCTTTATACATCAAGAGCACCATGGGCAAGCCCCAGC
GCCTGTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 712 .24 RPM |
| SRP021940_embryo | 730 .97 RPM |
| SRP021940_cerebellum | 365 .08 RPM |
| SRP021940_testis | 262 .42 RPM |
| SRP021940_placental_villous | 480 .58 RPM |
| SRP021940_articular_cartilage | 914 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000005760 | ortholog_one2one | 6 retrogenes | |
| Monodelphis domestica | ENSMODG00000013766 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000037805 | possible_ortholog | 8 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000014574 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016529 | ortholog_one2one | 10 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000002047 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001543 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_512 | 77.67 | 93.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_517 | 72.54 | 63.89 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000014090 retrocopies