Parental gene: | Rpl10a, ENSMUSG00000037805 |
| Aliases: | Rpl10a, CsA-19, Nedd6 |
| Description: | ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 17:28328470..28331032(+) |
>ENSMUSG00000037805
ATGAGCAGCAAAGTCTCACGCGACACCCTGTACGAGGCGGTGCGGGAAGTCCTGCACGGGAACCAGCGCAAGCGCCGCAA
GTTTCTGGAGACGGTGGAGCTGCAGATCAGCCTGAAGAACTACGACCCTCAGAAGGACAAACGTTTCTCGGGCACCGTCA
GGCTCAAGTCCACCCCACGCCCCAAGTTCTCGGTGTGCGTTCTGGGGGACCAGCAGCACTGTGATGAAGCCAAGGCCGTG
GATATCCCCCACATGGACATCGAGGCGCTCAAGAAGCTTAACAAAAACAAGAAGTTGGTCAAGAAGCTGGCTAAGAAGTA
CGATGCCTTTTTGGCCTCTGAGTCTCTGATTAAGCAGATCCCACGTATCCTGGGCCCAGGCCTAAACAAGGCTGGCAAGT
TCCCCTCCCTGCTGACACACAATGAAAACATGGTGGCCAAAGTGGATGAGGTGAAATCGACAATCAAGTTCCAGATGAAG
AAGGTGCTGTGTTTGGCCGTCGCTGTTGGCCACGTGAAGATGACCGATGATGAGCTAGTCTACAACATTCATCTGGCTGT
CAATTTCTTGGTGTCCTTGCTTAAGAAAAACTGGCAAAACGTGCGGGCTCTGTACATCAAGAGCACCATGGGCAAGCCCC
AGCGTCTGTATTAG
ATGAGCAGCAAAGTCTCACGCGACACCCTGTACGAGGCGGTGCGGGAAGTCCTGCACGGGAACCAGCGCAAGCGCCGCAA
GTTTCTGGAGACGGTGGAGCTGCAGATCAGCCTGAAGAACTACGACCCTCAGAAGGACAAACGTTTCTCGGGCACCGTCA
GGCTCAAGTCCACCCCACGCCCCAAGTTCTCGGTGTGCGTTCTGGGGGACCAGCAGCACTGTGATGAAGCCAAGGCCGTG
GATATCCCCCACATGGACATCGAGGCGCTCAAGAAGCTTAACAAAAACAAGAAGTTGGTCAAGAAGCTGGCTAAGAAGTA
CGATGCCTTTTTGGCCTCTGAGTCTCTGATTAAGCAGATCCCACGTATCCTGGGCCCAGGCCTAAACAAGGCTGGCAAGT
TCCCCTCCCTGCTGACACACAATGAAAACATGGTGGCCAAAGTGGATGAGGTGAAATCGACAATCAAGTTCCAGATGAAG
AAGGTGCTGTGTTTGGCCGTCGCTGTTGGCCACGTGAAGATGACCGATGATGAGCTAGTCTACAACATTCATCTGGCTGT
CAATTTCTTGGTGTCCTTGCTTAAGAAAAACTGGCAAAACGTGCGGGCTCTGTACATCAAGAGCACCATGGGCAAGCCCC
AGCGTCTGTATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 27 .90 RPM |
| SRP007412_cerebellum | 18 .45 RPM |
| SRP007412_heart | 34 .83 RPM |
| SRP007412_kidney | 40 .04 RPM |
| SRP007412_liver | 39 .90 RPM |
| SRP007412_testis | 16 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019494 | ortholog_one2one | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000012921 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000014090 | possible_ortholog | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000005760 | ortholog_one2many | 6 retrogenes | |
| Microcebus murinus | ENSMICG00000012458 | possible_ortholog | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000013766 | ortholog_one2many | 2 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000014574 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016529 | possible_ortholog | 10 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000002047 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001543 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_149 | 88.48 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_452 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1110 | 85.00 | 55.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_1304 | 71.23 | 99.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_1422 | 86.76 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_1737 | 87.69 | 88.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_2038 | 90.91 | 65.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mmus_2652 | 83.05 | 53.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000037805 retrocopies