Parental gene:

UBE2L3, ENSECAG00000019274

Aliases:None
Description:ubiquitin-conjugating enzyme E2L 3 [Source:HGNC Symbol;Acc:12488]
Organism:Horse (Equus caballus)
Coordinates:8:3326409..3358509(+)


>ENSECAG00000019274
CAGGAGCTTGAAGAAATCCGCAAATGTGGAATGAAAAACTTCCGTAACATCCAGGTTGATGAAGCTAATTTATTGACTTG
GCAAGGGCTTATTGTTCCTGACAACCCTCCATATGACAAGGGGGCCTTCAGAATCGAAATCAACTTTCCAGCAGAGTACC
CATTCAAACCACCGAAGATCACATTTAAAACAAAGATCTATCACCCGAACATTGATGAAAAGGGGCAGGTCTGTCTGCCG
GTAATTAGTGCTGAAAACTGGAAGCCAGCAACCAAAACCGACCAAGTAATCCAGTCCCTCATAGCACTGGTGAACGACCC
CCAGCCTGAGCACCCGCTTCGGGCTGACCTAGCTGAAGAATACTCTAAGGACCGTAAAAAATTCTGTAAGAACGCTGAAG
AGTTTACAAAGAAATATGGGGAAAAGCGACCTGTGGACTAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 5 .31 RPM
SRP021940_cerebellum 15 .74 RPM
SRP021940_embryo 16 .95 RPM
SRP021940_placental_villous 12 .89 RPM
SRP021940_synovial_membrane 9 .03 RPM
SRP021940_testis 40 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015284 possible_ortholog 1 retrogene
retro_cfam_1090,
Callithrix jacchus ENSCJAG00000015818 possible_ortholog 9 retrogenes
retro_cjac_1813, retro_cjac_1815, retro_cjac_1998, retro_cjac_2073, retro_cjac_2511, retro_cjac_2576, retro_cjac_2856, retro_cjac_3174, retro_cjac_3296,
Cavia porcellus ENSCPOG00000006044 possible_ortholog 2 retrogenes
retro_cpor_692, retro_cpor_835,
Dipodomys ordii ENSDORG00000011406 possible_ortholog 1 retrogene
retro_dord_357,
Equus caballus ENSECAG00000007233 other_paralog 1 retrogene
retro_ecab_196,
Equus caballus ENSECAG00000020678 within_species_paralog 1 retrogene
retro_ecab_859,
Felis catus ENSFCAG00000008008 possible_ortholog 1 retrogene
retro_fcat_369,
Homo sapiens ENSG00000185651 ortholog_one2one 4 retrogenes
retro_hsap_1094, retro_hsap_1185, retro_hsap_1338, retro_hsap_1960,
Gorilla gorilla ENSGGOG00000028073 possible_ortholog 3 retrogenes
retro_ggor_1425, retro_ggor_861, retro_ggor_924,
Myotis lucifugus ENSMLUG00000001547 ortholog_one2one 1 retrogene
retro_mluc_32,
Monodelphis domestica ENSMODG00000017665 possible_ortholog 2 retrogenes
retro_mdom_2029, retro_mdom_956,
Mus musculus ENSMUSG00000038965 possible_ortholog 10 retrogenes
retro_mmus_1619, retro_mmus_1620, retro_mmus_2147, retro_mmus_2212, retro_mmus_2272, retro_mmus_2315, retro_mmus_3205, retro_mmus_3714, retro_mmus_541, retro_mmus_995,
Nomascus leucogenys ENSNLEG00000000192 possible_ortholog 1 retrogene
retro_nleu_97,
Oryctolagus cuniculus ENSOCUG00000002610 ortholog_one2one 3 retrogenes
retro_ocun_826, retro_ocun_932, retro_ocun_937,
Pongo abelii ENSPPYG00000011602 possible_ortholog 1 retrogene
retro_pabe_99,
Pan troglodytes ENSPTRG00000014114 possible_ortholog 1 retrogene
retro_ptro_123,
Pteropus vampyrus ENSPVAG00000013575 ortholog_one2one 1 retrogene
retro_pvam_727,
Rattus norvegicus ENSRNOG00000001862 possible_ortholog 4 retrogenes
retro_rnor_1602, retro_rnor_2633, retro_rnor_2799, retro_rnor_526,
Sorex araneus ENSSARG00000005137 ortholog_one2one 3 retrogenes
retro_sara_105, retro_sara_277, retro_sara_653,
Ictidomys tridecemlineatus ENSSTOG00000016293 ortholog_one2one 2 retrogenes
retro_itri_1528, retro_itri_655,
Tetraodon nigroviridis ENSTNIG00000010600 ortholog_many2many 1 retrogene
retro_tnig_16,
Takifugu rubripes ENSTRUG00000003392 ortholog_one2many 1 retrogene
retro_trub_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_116 95.89 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSECAG00000019274 retrocopies