Parental gene:

NDFIP1, ENSECAG00000021907

Aliases:None
Description:Nedd4 family interacting protein 1 [Source:HGNC Symbol;Acc:17592]
Organism:Horse (Equus caballus)
Coordinates:14:34923786..34945363(-)


>ENSECAG00000021907
TTGCAGAATGAGGAAGAGCCAGGAGAGCCGGAGCAGGCCGCCGGCGACGCTCCTCCACCGTACAGCAGCATCTCTGCGGA
GAGCGCAGCATATTTTGACTACAAAGATGAGTCTGGGTTTCCAAAGCCCCCATCTTACAATGTGGCCACAACACTGCCCA
CTTATGATGAAGCCGAGAGAACCAAGGCTGAAGCTACTATCCCTTTGGTTCCTGGAAGAGATGAGGATTTTGTGGGTCGG
GATGATTTTGATGATGCTGACCAGCTGAGGATAGGAAACGATGGGATTTTCATGTTAACTTTTTTCATGGCATTCCTCTT
TAACTGGATCGGGTTTTTCCTGTCTTTTTGCCTGACCACCTCAGCTGCAGGAAGGTATGGGGCCATTTCAGGATTTGGTC
TCTCTCTAATTAAGTGGATCCTGATTGTCAGGTTTTCTACCTATTTCCCTGGATATTTTGATGGTCAGTACTGGCTCTGG
TGGGTGTTCCTGGTTTTAGGCTTTCTCCTGTTTCTCAGAGGATTTATCAATTATGCAAAAGTTCGGAAGATGCCAGAAAC
TTTCTCAAATCTCCCCAGGACCAGAGTTCTCTTTATTTATTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 103 .88 RPM
SRP021940_embryo 50 .92 RPM
SRP021940_cerebellum 160 .52 RPM
SRP021940_testis 49 .81 RPM
SRP021940_placental_villous 144 .57 RPM
SRP021940_articular_cartilage 95 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000047747 ortholog_one2one 1 retrogene
retro_btau_766,
Callithrix jacchus ENSCJAG00000018271 ortholog_one2one 1 retrogene
retro_cjac_3175,
Homo sapiens ENSG00000131507 ortholog_one2one 1 retrogene
retro_hsap_1091,
Gorilla gorilla ENSGGOG00000004879 ortholog_one2one 1 retrogene
retro_ggor_859,
Macaca mulatta ENSMMUG00000016787 ortholog_one2one 1 retrogene
retro_mmul_846,
Pongo abelii ENSPPYG00000015896 ortholog_one2one 1 retrogene
retro_pabe_908,
Pan troglodytes ENSPTRG00000017358 ortholog_one2one 1 retrogene
retro_ptro_743,
Sarcophilus harrisii ENSSHAG00000002466 ortholog_one2one 1 retrogene
retro_shar_738,
Sus scrofa ENSSSCG00000025295 ortholog_one2many 1 retrogene
retro_sscr_301,
Ictidomys tridecemlineatus ENSSTOG00000005153 ortholog_one2one 1 retrogene
retro_itri_1454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_261 77.94 66.50
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Download FASTA sequences of all ENSECAG00000021907 retrocopies