Parental gene:

MMU.4402, ENSMMUG00000016787

Aliases:None
Description:NEDD4 family-interacting protein 1 [Source:RefSeq peptide;Acc:NP_001180946]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:138526919..138574932(+)


>ENSMMUG00000016787
ATGGCGTTGGCGTTGGCGGCGCTGGCGGCGGTCGAGCCGGCCTGTGGCAGCCGGTACCAGCAGTTACAGAATGAAGAAGA
GTCTGGAGAACCTGAACAGGCTGCCGGTGATGCTCCTCCACCTTACAGCAGCATTTCTGCAGAGAGCGCAGCATATTTTG
ACTACAAGGATGAGTCTGGGTTTCCAAAGCCCCCATCTTACAATGTAGCTACAACACTGCCCAGTTATGATGAAGCGGAG
CGGACCAAGGCCGAAGCTACTATCCCTTTGGTTCCTGGGAGAGATGAGGATTTTGTGGGTCGGGATGATTTTGATGATGC
TGACCAGCTGAGGATAGGAAATGATGGGATTTTCATGTTAACTTTTTTCATGGCATTCCTCTTTAACTGGATTGGGTTTT
TCCTGTCTTTTTGCCTGACCACTTCAGCTGCAGGAAGGTATGGGGCCATTTCAGGATTTGGTCTCTCTCTAATTAAGTGG
ATCCTGATTGTCAGGTTTTCCACCTATTTCCCTGGATATTTTGATGGTCAGTACTGGCTCTGGTGGGTGTTCCTGGTTTT
AGGCTTTCTCCTGTTTCTCAGAGGATTTATCAATTATGCAAAAGTTCGGAAGATGCCAGAAACTTTCTCAAATCTCCCCA
GGACCAGAGTTCTCTTTATTTATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 196 .58 RPM
SRP007412_brain 251 .33 RPM
SRP007412_cerebellum 187 .01 RPM
SRP007412_heart 54 .88 RPM
SRP007412_kidney 125 .12 RPM
SRP007412_liver 49 .52 RPM
SRP007412_testis 40 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000047747 ortholog_one2one 1 retrogene
retro_btau_766,
Callithrix jacchus ENSCJAG00000018271 ortholog_one2one 1 retrogene
retro_cjac_3175,
Equus caballus ENSECAG00000021907 ortholog_one2one 1 retrogene
retro_ecab_261,
Homo sapiens ENSG00000131507 ortholog_one2one 1 retrogene
retro_hsap_1091,
Gorilla gorilla ENSGGOG00000004879 ortholog_one2one 1 retrogene
retro_ggor_859,
Pongo abelii ENSPPYG00000015896 ortholog_one2one 1 retrogene
retro_pabe_908,
Pan troglodytes ENSPTRG00000017358 ortholog_one2one 1 retrogene
retro_ptro_743,
Sarcophilus harrisii ENSSHAG00000002466 ortholog_one2one 1 retrogene
retro_shar_738,
Sus scrofa ENSSSCG00000025295 ortholog_one2many 1 retrogene
retro_sscr_301,
Ictidomys tridecemlineatus ENSSTOG00000005153 ortholog_one2one 1 retrogene
retro_itri_1454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_846 61.88 80.54
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Download FASTA sequences of all ENSMMUG00000016787 retrocopies