Parental gene: | ERH, ENSEEUG00000007758 |
| Aliases: | None |
| Description: | enhancer of rudimentary homolog (Drosophila) [Source:HGNC Symbol;Acc:3447] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_1405:14080..25351(-) |
>ENSEEUG00000007758
ATGTCTCACACCATTTTGTTGGTACAGCCTACCAAGAGGCCAGAAGGCAGAACTTATGCAGACTACGAATCTGTGAATGA
ATGCATGGAAGGTGTTTGTAAAATGTATGAAGAGCATCTGAAAAGAATGAATCCCAACAGTCCCTCTATCACATACGACA
TCAGTCAATTGTTTGATTTTATTGATGATCTGGCAGACCTCAGCTGTCTTGTTTACCGAGCTGATACCCAGACATACCAA
CCTTATAACAAAGATTGGATTAAAGAGAAGATCTACGTGCTTCTTCGTCGACAGGCCCAACAGGCTGGGAAATAA
ATGTCTCACACCATTTTGTTGGTACAGCCTACCAAGAGGCCAGAAGGCAGAACTTATGCAGACTACGAATCTGTGAATGA
ATGCATGGAAGGTGTTTGTAAAATGTATGAAGAGCATCTGAAAAGAATGAATCCCAACAGTCCCTCTATCACATACGACA
TCAGTCAATTGTTTGATTTTATTGATGATCTGGCAGACCTCAGCTGTCTTGTTTACCGAGCTGATACCCAGACATACCAA
CCTTATAACAAAGATTGGATTAAAGAGAAGATCTACGTGCTTCTTCGTCGACAGGCCCAACAGGCTGGGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 12 .70 RPM |
| SRP017611_kidney | 29 .26 RPM |
| SRP017611_brain | 29 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000017798 | ortholog_one2one | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000014940 | possible_ortholog | 2 retrogenes | |
| Equus caballus | ENSECAG00000019178 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000016172 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000100632 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011879 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004636 | possible_ortholog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000000086 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000005939 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000002307 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000013963 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000006444 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_105 | 86.67 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_108 | 93.27 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_115 | 90.48 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_eeur_116 | 80.77 | 98.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_eeur_185 | 88.57 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_eeur_546 | 90.48 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000007758 retrocopies