Parental gene: | SEC11C, ENSETEG00000005115 |
| Aliases: | None |
| Description: | SEC11 homolog C (S. cerevisiae) [Source:HGNC Symbol;Acc:23400] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_6344:10528..27393(+) |
>ENSETEG00000005115
ATGGTACGCGCCAGCCCTGTGGGGACGCATCTCCCCGCGTCCGGCTTGGACATTTTCGGGGACCTAAGGAAGATGAACAA
GCGCCAGCTCTACTACCAGGTGCTGAACTTCGCCATGATCGTGTCCTCCGCGCTCATGATCTGGAAAGGCTTGATCGTCC
TCACAGGCAGCGAGAGCCCCATTGTGGTGGTGCTGAGTGGCAGCATGGAGCCGGCCTTCCACCGCGGAGACCTCCTCTTC
CTGACCAACTTCCGGGAAGACCCCATTAGAGCCGGCGAGATCGTCGTCTTCAAAGTCGAAGGGCGAGACATTCCAATTGT
GCACAGAGTCATCAAAGTCCATGAAAAGGATAATGGCGACATCAAGTTCCTGACCAAAGGTGATAATAACGAGGTGGATG
ACAGAGGCTTGTACAAGGAAGGCCAGAACTGGCTGGAAAAGAAGGACGTGGTGGGAAGAGCAAGAGGGTTTTTACCCTAT
GTCGGTATGGTTACCATAATAATGAATGACTATCCAAAATTCAAGTACGCCCTGCTGGCTGTGATGGGCGCCTATGTGCT
ACTCAAACGCGAGTCCTGA
ATGGTACGCGCCAGCCCTGTGGGGACGCATCTCCCCGCGTCCGGCTTGGACATTTTCGGGGACCTAAGGAAGATGAACAA
GCGCCAGCTCTACTACCAGGTGCTGAACTTCGCCATGATCGTGTCCTCCGCGCTCATGATCTGGAAAGGCTTGATCGTCC
TCACAGGCAGCGAGAGCCCCATTGTGGTGGTGCTGAGTGGCAGCATGGAGCCGGCCTTCCACCGCGGAGACCTCCTCTTC
CTGACCAACTTCCGGGAAGACCCCATTAGAGCCGGCGAGATCGTCGTCTTCAAAGTCGAAGGGCGAGACATTCCAATTGT
GCACAGAGTCATCAAAGTCCATGAAAAGGATAATGGCGACATCAAGTTCCTGACCAAAGGTGATAATAACGAGGTGGATG
ACAGAGGCTTGTACAAGGAAGGCCAGAACTGGCTGGAAAAGAAGGACGTGGTGGGAAGAGCAAGAGGGTTTTTACCCTAT
GTCGGTATGGTTACCATAATAATGAATGACTATCCAAAATTCAAGTACGCCCTGCTGGCTGTGATGGGCGCCTATGTGCT
ACTCAAACGCGAGTCCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000017024 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000006501 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016052 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000020427 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009204 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000002570 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002950 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000004912 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014804 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007676 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_1081 | 67.89 | 55.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_1139 | 93.30 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000005115 retrocopies