Parental gene:

ENSMODG00000020427

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:3:246425388..246448051(-)


>ENSMODG00000020427
ATGGACATCTTCGGGGACCTAAGGAGGATGAACAAGCGCCAGCTGTATTACCAGATTTTAAACTTTGCCATGATTGTATC
TTCTGCTCTTATGATATGGAAAGGCTTGATAGTTGCCACTGGAAGTGAAAGTCCTATTGTGGTGGTGCTGAGTGGCAGTA
TGGAGCCAGCATTTCATAGAGGAGACCTTCTGTTTTTAACAAATTTCCGGAAAGATCCCATTAGAGCTGGGGAAATAGTC
GTTTTTAAAGTTGAAGGAAGAGATATTCCTATAGTCCACAGAGTCATCAAAGTTCACGAAAAAGATAATGGAAATGTCAA
ATTTCTGACTAAAGGAGATAATAATGAAGTTGATGATAGAGGTTTGTACAAAGAAGGTCAAAACTGGCTAGAAAAGAAGG
ATGTTGTAGGAAGAGCAAGAGGGTTTTTGCCATACATTGGGATGGTTACCATAATCATGAATGATTATCCGAAATTCAAG
TATGCTCTTTTGGCTGTAATGGGTGCATATGTGATACTGAAACGTGAATCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000017024 possible_ortholog 3 retrogenes
retro_ecab_1009, retro_ecab_455, retro_ecab_989,
Echinops telfairi ENSETEG00000005115 possible_ortholog 2 retrogenes
retro_etel_1081, retro_etel_1139,
Felis catus ENSFCAG00000006501 possible_ortholog 1 retrogene
retro_fcat_1815,
Microcebus murinus ENSMICG00000016052 possible_ortholog 1 retrogene
retro_mmur_271,
Monodelphis domestica ENSMODG00000019364 within_species_paralog 1 retrogene
retro_mdom_726,
Oryctolagus cuniculus ENSOCUG00000009204 possible_ortholog 2 retrogenes
retro_ocun_738, retro_ocun_895,
Otolemur garnettii ENSOGAG00000002570 possible_ortholog 1 retrogene
retro_ogar_400,
Pteropus vampyrus ENSPVAG00000002950 possible_ortholog 2 retrogenes
retro_pvam_620, retro_pvam_869,
Sus scrofa ENSSSCG00000004912 possible_ortholog 1 retrogene
retro_sscr_775,
Tupaia belangeri ENSTBEG00000014804 possible_ortholog 1 retrogene
retro_tbel_2357,
Tursiops truncatus ENSTTRG00000007676 possible_ortholog 5 retrogenes
retro_ttru_1278, retro_ttru_1508, retro_ttru_1780, retro_ttru_1916, retro_ttru_490,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_377 88.08 83.62
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2. retro_mdom_1517 74.25 92.09
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Download FASTA sequences of all ENSMODG00000020427 retrocopies